Factsheet for VIT_11s0052g01210.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
PProwler:	secretory
WoLF PSORT:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g01280.t01	Wine grape	endoplasmic reticulum, extracellular	13.71	73.31
VIT_11s0052g01320.t01	Wine grape	extracellular	13.58	72.64
VIT_11s0052g01220.t01	Wine grape	extracellular	13.08	72.63
VIT_11s0052g01330.t01	Wine grape	extracellular, vacuole	12.0	72.52
VIT_11s0052g01300.t01	Wine grape	extracellular	13.46	71.96
VIT_11s0052g01200.t01	Wine grape	extracellular	13.46	71.72
VIT_11s0052g01260.t01	Wine grape	endoplasmic reticulum, extracellular	13.33	71.28
VIT_11s0052g01270.t01	Wine grape	extracellular	13.33	71.04
VIT_11s0052g01340.t01	Wine grape	extracellular	12.0	69.85
VIT_11s0052g01310.t01	Wine grape	extracellular	11.81	69.52
VIT_05s0062g00610.t01	Wine grape	cytosol	11.56	69.06
VIT_11s0052g01250.t01	Wine grape	extracellular	12.57	68.86
VIT_05s0062g00480.t01	Wine grape	cytosol	11.5	68.68
VIT_10s0003g02440.t01	Wine grape	extracellular	11.62	67.4
VIT_11s0052g01180.t01	Wine grape	cytosol	13.52	66.67
VIT_11s0052g01230.t01	Wine grape	cytosol	11.69	66.55
VIT_05s0062g00240.t01	Wine grape	extracellular	11.75	66.19
VIT_05s0062g00250.t01	Wine grape	extracellular	11.56	65.59
VIT_11s0052g01190.t01	Wine grape	vacuole	13.71	58.81
VIT_11s0016g03480.t01	Wine grape	extracellular	9.98	54.3
VIT_17s0053g00610.t01	Wine grape	cytosol	6.82	50.0
VIT_01s0150g00460.t01	Wine grape	extracellular	9.29	47.88
VIT_03s0088g00650.t01	Wine grape	extracellular, vacuole	8.59	46.1
VIT_12s0134g00160.t01	Wine grape	extracellular	8.4	44.93
VIT_10s0116g00520.t01	Wine grape	extracellular, vacuole	8.02	42.33

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EMBL:AM430670	ProteinID:CAN80251	ProteinID:CAN80251.1	ncoils:Coil
InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF100	SUPFAM:SSF49899	UniParc:UPI00023E408E	ArrayExpress:VIT_11s0052g01210	EnsemblPlantsGene:VIT_11s0052g01210
EnsemblPlants:VIT_11s0052g01210.t01	InterPro:XET_C	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr11:-:18949294..18956457

Molecular Weight (calculated)

32911.8 Da

IEP (calculated)

4.821

GRAVY (calculated)

-0.048

Length

1583 amino acids

Sequence
(BLAST)

0001: MGKQKVAEXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0601: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0701: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0801: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0901: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXL
1301: PKGLRGLAGL QVSLIISFLA AASAGNFYQD FDITWGDGRA KILNNGELLT LSLDKASGSG FQSKNEYLFG KIAMQIKLVP GNSAGTVTAY YLSSKEWETH
1401: DEIDFEFLGN LSGDPYILHT NVYIQGQGKR EKQFYLWFDP TADFHNYSIL WNPQCVVFWV DGIPIREFKN LESAGVLFPK SQPMRIYSSL WNADDWATRG
1501: GLVKTNWSQA PFVASYRSFN ADACILYSGT SSCSWDSPPW LSQVLDSTDQ QKMKWVEDNY MIYNYCTDAE RFSQGLPTEC MVT

Best Arabidopsis Sequence Match ( AT2G18800.1 )
(BLAST)

001: MVSSTLLVMS ISLFLGLSIL LVVHGKDFNQ DIDITWGDGR GNILNNGTLL NLGLDQSSGS GFQSKAEYLY GKVDMQIKLV PGNSAGTVTT FYLKSQGLTW
101: DEIDFEFLGN VSGDPYIVHT NVYTQGKGDR EQQFYLWFDP TAAFHNYSIL WNPSHIVFYI DGKPIREFKN LEVLGVAYPK NQPMRMYGSL WNADDWATRG
201: GLVKTNWSQG PFVASFMNYN SENACVWSIV NGTTTTSPCS PGDSTSSSSS STSEWFSQRG MDSSSKKVLR WVQRKFMVYN YCKDKKRFSN GLPVECTAKN
301: KNTKS

Arabidopsis Description

XTH21Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VQ29]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.