Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P19320_001 | Banana | vacuole | 74.07 | 56.34 |
| PGSC0003DMT400026398 | Potato | extracellular | 69.44 | 53.0 |
| Solyc03g098430.2.1 | Tomato | extracellular | 68.98 | 52.65 |
| VIT_12s0134g00160.t01 | Wine grape | extracellular | 62.96 | 45.95 |
| VIT_11s0052g01330.t01 | Wine grape | extracellular, vacuole | 50.93 | 41.98 |
| VIT_10s0003g02440.t01 | Wine grape | extracellular | 50.46 | 39.93 |
| VIT_11s0052g01220.t01 | Wine grape | extracellular | 51.85 | 39.3 |
| VIT_11s0052g01230.t01 | Wine grape | cytosol | 50.46 | 39.21 |
| VIT_05s0062g00480.t01 | Wine grape | cytosol | 47.69 | 38.87 |
| VIT_05s0062g00610.t01 | Wine grape | cytosol | 47.69 | 38.87 |
| VIT_11s0052g01250.t01 | Wine grape | extracellular | 51.85 | 38.75 |
| VIT_11s0052g01260.t01 | Wine grape | endoplasmic reticulum, extracellular | 52.31 | 38.18 |
| VIT_11s0052g01200.t01 | Wine grape | extracellular | 52.31 | 38.05 |
| VIT_11s0052g01300.t01 | Wine grape | extracellular | 51.85 | 37.84 |
| VIT_11s0052g01320.t01 | Wine grape | extracellular | 51.39 | 37.5 |
| VIT_11s0016g03480.t01 | Wine grape | extracellular | 50.46 | 37.46 |
| VIT_11s0052g01280.t01 | Wine grape | endoplasmic reticulum, extracellular | 50.93 | 37.16 |
| VIT_05s0062g00240.t01 | Wine grape | extracellular | 48.15 | 37.01 |
| VIT_05s0062g00250.t01 | Wine grape | extracellular | 47.69 | 36.92 |
| VIT_11s0052g01270.t01 | Wine grape | extracellular | 50.46 | 36.7 |
| VIT_01s0150g00460.t01 | Wine grape | extracellular | 51.85 | 36.48 |
| VIT_11s0052g01310.t01 | Wine grape | extracellular | 45.37 | 36.43 |
| VIT_10s0116g00520.t01 | Wine grape | extracellular, vacuole | 50.46 | 36.33 |
| VIT_03s0088g00650.t01 | Wine grape | extracellular, vacuole | 49.54 | 36.27 |
| VIT_11s0052g01180.t01 | Wine grape | cytosol | 51.85 | 34.89 |
| VIT_11s0052g01340.t01 | Wine grape | extracellular | 43.06 | 34.19 |
| VIT_11s0052g01190.t01 | Wine grape | vacuole | 51.85 | 30.35 |
| VIT_11s0052g01210.t01 | Wine grape | extracellular, plastid | 50.0 | 6.82 |
Protein Annotations
| EntrezGene:100244455 | wikigene:100244455 | Gene3D:2.60.120.200 | MapMan:50.2.4 | ProteinID:CCB58803 | ProteinID:CCB58803.1 |
| ncoils:Coil | InterPro:ConA-like_dom_sf | UniProt:F6HVU0 | EMBL:FN596258 | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 |
| GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | EntrezGene:LOC100244455 | wikigene:LOC100244455 | PFAM:PF00722 |
| PFAM:PF06955 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF54 | SUPFAM:SSF49899 |
| UniParc:UPI000210A1B3 | ArrayExpress:VIT_17s0053g00610 | EnsemblPlantsGene:VIT_17s0053g00610 | EnsemblPlants:VIT_17s0053g00610.t01 | InterPro:XET_C | RefSeq:XP_002264467 |
| RefSeq:XP_002264467.1 | : | : | : | : | : |
Description
Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HVU0]
Coordinates
chr17:-:15631827..15632949
Molecular Weight (calculated)
24835.1 Da
IEP (calculated)
5.885
GRAVY (calculated)
-0.498
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVKLVEGDS AGTVTALYMA SEGLNHDELD FEFLGNVSGE PYLVQTNVYV NGTGNREQRH TLWFDPTAAF HTYSFLWNRY SILFLVDEVP IRVFANKEEN
101: GAPYPKTQAM GVQGSVWNAD DWATQGGRVK TNWSHAPFVS TFRGFEIDAC ELSPETDDIA SSKCGRVGEF WWDKPRMSGL NRHKSHQLKW VRRRHLVYDY
201: CMDSGRFYEM PRECIV
101: GAPYPKTQAM GVQGSVWNAD DWATQGGRVK TNWSHAPFVS TFRGFEIDAC ELSPETDDIA SSKCGRVGEF WWDKPRMSGL NRHKSHQLKW VRRRHLVYDY
201: CMDSGRFYEM PRECIV
001: MSFIGQAGLW IIVSTKAKSQ NSSLTITLVR AGFESRSKYL FGKVSIQIKL VEGDSAGTVT AFYMSSDGPN HNEFDFEFLG NTTGEPYIVQ TNIYVNGVGN
101: REQRLNLWFD PTTEFHTYSI LWSKRSVVFM VDETPIRVQK NLEEKGIPFA KDQAMGVYSS IWNADDWATQ GGLVKTDWSH APFVASYKEF QIDACEIPTT
201: TDLSKCNGDQ KFWWDEPTVS ELSLHQNHQL IWVRANHMIY DYCFDATRFP VTPLECQHHR HL
101: REQRLNLWFD PTTEFHTYSI LWSKRSVVFM VDETPIRVQK NLEEKGIPFA KDQAMGVYSS IWNADDWATQ GGLVKTDWSH APFVASYKEF QIDACEIPTT
201: TDLSKCNGDQ KFWWDEPTVS ELSLHQNHQL IWVRANHMIY DYCFDATRFP VTPLECQHHR HL
Arabidopsis Description
XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.