Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0052g01330.t01 | Wine grape | extracellular, vacuole | 73.21 | 89.69 |
| VIT_11s0052g01270.t01 | Wine grape | extracellular | 80.37 | 86.87 |
| VIT_11s0052g01200.t01 | Wine grape | extracellular | 80.06 | 86.53 |
| VIT_11s0052g01340.t01 | Wine grape | extracellular | 72.27 | 85.29 |
| VIT_11s0052g01280.t01 | Wine grape | endoplasmic reticulum, extracellular | 78.19 | 84.8 |
| VIT_11s0052g01320.t01 | Wine grape | extracellular | 77.88 | 84.46 |
| VIT_11s0052g01300.t01 | Wine grape | extracellular | 77.88 | 84.46 |
| VIT_11s0052g01260.t01 | Wine grape | endoplasmic reticulum, extracellular | 77.26 | 83.78 |
| VIT_11s0052g01220.t01 | Wine grape | extracellular | 73.52 | 82.81 |
| VIT_11s0052g01310.t01 | Wine grape | extracellular | 67.6 | 80.67 |
| Solyc03g093080.2.1 | Tomato | extracellular | 70.09 | 78.67 |
| Solyc03g093130.2.1 | Tomato | extracellular | 69.78 | 78.05 |
| PGSC0003DMT400038413 | Potato | extracellular | 69.47 | 77.97 |
| Solyc03g093120.2.1 | Tomato | extracellular | 69.47 | 77.97 |
| Solyc03g093110.2.1 | Tomato | extracellular | 69.16 | 77.35 |
| VIT_05s0062g00610.t01 | Wine grape | cytosol | 63.55 | 76.98 |
| VIT_05s0062g00480.t01 | Wine grape | cytosol | 63.55 | 76.98 |
| VIT_11s0052g01250.t01 | Wine grape | extracellular | 68.85 | 76.47 |
| VIT_10s0003g02440.t01 | Wine grape | extracellular | 64.49 | 75.82 |
| VIT_11s0052g01230.t01 | Wine grape | cytosol | 64.8 | 74.82 |
| VIT_05s0062g00250.t01 | Wine grape | extracellular | 64.8 | 74.55 |
| VIT_05s0062g00240.t01 | Wine grape | extracellular | 61.99 | 70.82 |
| VIT_11s0052g01190.t01 | Wine grape | vacuole | 80.69 | 70.19 |
| VIT_11s0016g03480.t01 | Wine grape | extracellular | 47.98 | 52.92 |
| VIT_17s0053g00610.t01 | Wine grape | cytosol | 34.89 | 51.85 |
| VIT_01s0150g00460.t01 | Wine grape | extracellular | 47.35 | 49.51 |
| VIT_03s0088g00650.t01 | Wine grape | extracellular, vacuole | 42.99 | 46.78 |
| VIT_12s0134g00160.t01 | Wine grape | extracellular | 42.06 | 45.61 |
| VIT_10s0116g00520.t01 | Wine grape | extracellular, vacuole | 40.19 | 43.0 |
| VIT_11s0052g01210.t01 | Wine grape | extracellular, plastid | 66.67 | 13.52 |
Protein Annotations
| EntrezGene:100261619 | wikigene:100261619 | Gene3D:2.60.120.200 | MapMan:50.2.4 | ProteinID:CCB44635 | ProteinID:CCB44635.1 |
| InterPro:ConA-like_dom_sf | UniProt:F6GXE9 | EMBL:FN594964 | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 |
| GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | EntrezGene:LOC100261619 | wikigene:LOC100261619 |
| PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 |
| PANTHER:PTHR31062:SF100 | SUPFAM:SSF49899 | UniParc:UPI000210897E | ArrayExpress:VIT_11s0052g01180 | EnsemblPlantsGene:VIT_11s0052g01180 | EnsemblPlants:VIT_11s0052g01180.t01 |
| unigene:Vvi.15231 | InterPro:XET_C | RefSeq:XP_003633213 | RefSeq:XP_003633213.1 | InterPro:XTH | SEG:seg |
Description
Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6GXE9]
Coordinates
chr11:-:18940464..18942492
Molecular Weight (calculated)
36504.2 Da
IEP (calculated)
4.587
GRAVY (calculated)
-0.596
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASAGNFYQ DFDITWGDGR AKILNNGELL TLSLDKTSGS GFQSKNEYLF GKIDMQLKLV PGNSAGTVTA YYLSSQGPTH DEIDFEFLGN LSGDPYILHT
101: NVFSQGKGNR EQQFYLWFDP TADFHTYSIL WNPQRIIFSV DGTPIREFKN SESIGVSYPK NQPMRIYSSL WNADDWATRG GLVKTDWSQA PFTASYRNFN
201: ADACIWSSGA SSCSSNTPTS TSTNTEWYSQ ELDSTSQERM KWVQKNYMIY NYCSDTKRFP QGLPPECTTT TIWDSPPWLS QVLDFKDQQK MKWVEDNYMI
301: YNYCADTGRF PQGLPTECTV T
101: NVFSQGKGNR EQQFYLWFDP TADFHTYSIL WNPQRIIFSV DGTPIREFKN SESIGVSYPK NQPMRIYSSL WNADDWATRG GLVKTDWSQA PFTASYRNFN
201: ADACIWSSGA SSCSSNTPTS TSTNTEWYSQ ELDSTSQERM KWVQKNYMIY NYCSDTKRFP QGLPPECTTT TIWDSPPWLS QVLDFKDQQK MKWVEDNYMI
301: YNYCADTGRF PQGLPTECTV T
001: MDRSTFILSL LFTLTVSTTT LFSPVFAGTF DTEFDITWGD GRGKVLNNGE LLTLSLDRAS GSGFQTKKEY LFGKIDMQLK LVPGNSAGTV TAYYLKSKGD
101: TWDEIDFEFL GNLTGDPYTM HTNVYTQGKG DREQQFHLWF DPTADFHTYS VLWNPHHIVF MVDDIPVREF KNLQHMGIQY PKLQPMRLYS SLWNADQWAT
201: RGGLVKTDWS KAPFTASYRN FRADACVSSG GRSSCPAGSP RWFSQRLDLT AEDKMRVVQR KYMIYNYCTD TKRFPQGFPK ECRH
101: TWDEIDFEFL GNLTGDPYTM HTNVYTQGKG DREQQFHLWF DPTADFHTYS VLWNPHHIVF MVDDIPVREF KNLQHMGIQY PKLQPMRLYS SLWNADQWAT
201: RGGLVKTDWS KAPFTASYRN FRADACVSSG GRSSCPAGSP RWFSQRLDLT AEDKMRVVQR KYMIYNYCTD TKRFPQGFPK ECRH
Arabidopsis Description
XTH25Probable xyloglucan endotransglucosylase/hydrolase protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q38907]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.