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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g093130.2.1 Tomato extracellular 98.61 98.61
Solyc03g093120.2.1 Tomato extracellular 97.91 98.25
Solyc03g093080.2.1 Tomato extracellular 96.86 97.2
PGSC0003DMT400038413 Potato extracellular 92.68 93.01
VIT_11s0052g01330.t01 Wine grape extracellular, vacuole 71.43 78.24
VIT_11s0052g01280.t01 Wine grape endoplasmic reticulum, extracellular 78.05 75.68
VIT_11s0052g01200.t01 Wine grape extracellular 78.05 75.42
VIT_11s0052g01320.t01 Wine grape extracellular 77.7 75.34
KRH02893 Soybean extracellular 74.56 75.09
KRH02890 Soybean extracellular 74.56 75.09
KRH19005 Soybean vacuole 74.22 74.74
VIT_11s0052g01300.t01 Wine grape extracellular 77.0 74.66
VIT_11s0052g01260.t01 Wine grape endoplasmic reticulum, extracellular 76.66 74.32
KRH19002 Soybean extracellular 73.17 73.68
VIT_11s0052g01270.t01 Wine grape extracellular 75.61 73.06
KRH02894 Soybean endoplasmic reticulum, extracellular 73.52 72.26
VIT_11s0052g01340.t01 Wine grape extracellular 68.29 72.06
KRH02892 Soybean extracellular 71.78 71.78
KRH19003 Soybean extracellular 71.08 71.08
VIT_11s0052g01310.t01 Wine grape extracellular 66.55 71.0
KRH02895 Soybean cytosol 71.78 70.31
VIT_11s0052g01180.t01 Wine grape cytosol 77.35 69.16
Solyc07g006860.2.1 Tomato extracellular 68.64 69.12
Solyc12g098610.1.1 Tomato nucleus 61.67 67.82
Solyc07g009380.2.1 Tomato extracellular, nucleus 64.81 67.64
Solyc05g046290.2.1 Tomato extracellular 67.25 67.01
Solyc09g092520.2.1 Tomato nucleus 63.76 66.3
Solyc07g006870.2.1 Tomato extracellular, vacuole 63.41 64.54
VIT_11s0052g01190.t01 Wine grape vacuole 78.4 60.98
Solyc07g056000.2.1 Tomato extracellular, nucleus 59.23 59.23
Solyc12g017240.1.1 Tomato extracellular 59.23 58.82
Solyc07g055990.2.1 Tomato nucleus 58.88 58.28
Solyc12g011030.1.1 Tomato nucleus 52.96 54.87
Solyc07g006850.1.1 Tomato golgi 63.76 53.51
Solyc12g007270.1.1 Tomato extracellular 54.36 53.24
Solyc12g007250.1.1 Tomato extracellular 50.17 49.48
Solyc12g007260.1.1 Tomato extracellular 49.13 48.29
Solyc11g065600.1.1 Tomato nucleus 48.43 47.44
Solyc03g098430.2.1 Tomato extracellular 45.99 46.64
Solyc07g052980.2.1 Tomato extracellular 48.08 46.62
Solyc01g099630.2.1 Tomato extracellular 46.34 44.93
Solyc02g091920.2.1 Tomato nucleus 45.99 44.75
Solyc11g040140.1.1 Tomato extracellular 46.69 44.67
Solyc03g031800.2.1 Tomato extracellular 44.25 43.05
Solyc10g005350.2.1 Tomato extracellular 42.16 42.01
Solyc01g106650.2.1 Tomato extracellular, vacuole 41.46 40.61
Solyc02g080160.2.1 Tomato extracellular 41.46 39.93
Protein Annotations
Gene3D:2.60.120.200MapMan:50.2.4InterPro:Beta_glucanaseInterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_AS
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618
GO:GO:0005623GO:GO:0005975GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0010411GO:GO:0016043GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0016798
GO:GO:0030312GO:GO:0042546GO:GO:0048046GO:GO:0071555InterPro:IPR000757UniProt:K4BII8
PFAM:PF00722PFAM:PF06955PIRSF:PIRSF005604PRINTS:PR00737ScanProsite:PS01034PFscan:PS51762
PANTHER:PTHR31062PANTHER:PTHR31062:SF101SUPFAM:SSF49899SignalP:SignalP-noTMEnsemblPlantsGene:Solyc03g093110.2EnsemblPlants:Solyc03g093110.2.1
TMHMM:TMhelixUniParc:UPI0002768EE7InterPro:XET_CInterPro:XTHSEG:seg:
Description
Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:K4BII8]
Coordinates
chr3:-:54284652..54285913
Molecular Weight (calculated)
32268.6 Da
IEP (calculated)
5.329
GRAVY (calculated)
-0.406
Length
287 amino acids
Sequence
(BLAST)
001: MASSSSKLVL VMCFMISAFG IAIGAKFDQE FDITWGDGRA KILNNGDLLT LSLDKISGSG FQSKNEYLFG KIDMQLKLVP RNSAGTVTAY YLSSQGPTHD
101: EIDFEFLGNL SGDPYTLHTN VFSQGKGNRE QQFHLWFDPT ADFHTYAITW NPQRIIFYVD GTPIREYKNS ESIGVSYPKN QPMRIYSSLW NADDWATRGG
201: LVKTDWSQAP FSASYRNFSA NACIPTSSSS CSSISATSTS NSWLNEELDN TSQERLKWVQ KNYMVYDYCT DSKRFPQGFP ADCVQNI
Best Arabidopsis Sequence Match ( AT4G25810.1 )
(BLAST)
001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
Arabidopsis Description
XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.