Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
25724908
|
msms PMID:
25724908
doi
From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH02892 | Soybean | extracellular | 91.29 | 91.29 |
| KRH02890 | Soybean | extracellular | 81.18 | 81.75 |
| KRH02893 | Soybean | extracellular | 81.18 | 81.75 |
| KRH19005 | Soybean | vacuole | 80.84 | 81.4 |
| KRH19002 | Soybean | extracellular | 79.44 | 80.0 |
| KRH02894 | Soybean | endoplasmic reticulum, extracellular | 79.79 | 78.42 |
| KRH19136 | Soybean | nucleus | 77.0 | 78.09 |
| KRH02895 | Soybean | cytosol | 77.0 | 75.43 |
| KRH37378 | Soybean | nucleus | 68.99 | 74.44 |
| Solyc03g093080.2.1 | Tomato | extracellular | 73.17 | 73.43 |
| PGSC0003DMT400038413 | Potato | extracellular | 72.82 | 73.08 |
| Solyc03g093120.2.1 | Tomato | extracellular | 72.13 | 72.38 |
| Solyc03g093130.2.1 | Tomato | extracellular | 72.13 | 72.13 |
| Solyc03g093110.2.1 | Tomato | extracellular | 71.08 | 71.08 |
| KRH31558 | Soybean | nucleus | 68.29 | 71.01 |
| KRG97361 | Soybean | nucleus | 68.64 | 70.61 |
| KRH02889 | Soybean | extracellular | 71.43 | 70.45 |
| KRH19006 | Soybean | vacuole | 70.73 | 69.28 |
| KRH58823 | Soybean | extracellular, nucleus | 67.6 | 68.55 |
| KRH42721 | Soybean | extracellular, nucleus | 67.25 | 68.2 |
| KRH12375 | Soybean | extracellular | 68.99 | 62.66 |
| KRH59064 | Soybean | extracellular | 62.37 | 60.47 |
| KRH42944 | Soybean | extracellular | 61.67 | 60.2 |
| KRH41530 | Soybean | nucleus | 53.31 | 54.06 |
| KRH14468 | Soybean | extracellular | 54.01 | 53.82 |
| KRH73676 | Soybean | extracellular | 52.61 | 53.36 |
| KRH76320 | Soybean | nucleus | 52.61 | 52.25 |
| KRH39331 | Soybean | nucleus | 52.26 | 51.9 |
| KRG98913 | Soybean | vacuole | 51.92 | 51.74 |
| KRH58172 | Soybean | extracellular, vacuole | 49.48 | 48.8 |
| KRH22496 | Soybean | extracellular | 49.13 | 48.62 |
| KRH25426 | Soybean | extracellular | 49.13 | 47.32 |
| KRH26853 | Soybean | vacuole | 48.78 | 47.3 |
| KRH04364 | Soybean | extracellular | 48.08 | 47.26 |
| KRH56088 | Soybean | vacuole | 48.78 | 47.14 |
| KRH06776 | Soybean | endoplasmic reticulum | 48.43 | 47.12 |
| KRH70105 | Soybean | nucleus | 50.52 | 46.93 |
| KRG94750 | Soybean | endoplasmic reticulum | 48.08 | 46.78 |
| KRH35625 | Soybean | vacuole | 47.39 | 45.95 |
| KRH77174 | Soybean | extracellular | 47.39 | 45.95 |
| KRG91154 | Soybean | extracellular | 46.69 | 45.27 |
| KRH28311 | Soybean | extracellular, vacuole | 46.69 | 45.12 |
| KRG91233 | Soybean | extracellular | 45.64 | 43.52 |
| KRG94748 | Soybean | extracellular, vacuole | 39.02 | 43.24 |
| KRH35587 | Soybean | extracellular | 44.95 | 42.72 |
| KRH06775 | Soybean | endoplasmic reticulum | 48.43 | 40.29 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | UniProt:A0A0R0GVM5 | EMBL:ACUP02008154 | InterPro:ConA-like_dom_sf | InterPro:GH16 |
| InterPro:GH16_AS | EnsemblPlantsGene:GLYMA_13G095000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 |
| InterPro:IPR000757 | EnsemblPlants:KRH19003 | ProteinID:KRH19003 | ProteinID:KRH19003.1 | PFAM:PF00722 | PFAM:PF06955 |
| PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF100 | SUPFAM:SSF49899 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001B63965 | InterPro:XET_C | InterPro:XTH | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:-:21005327..21006774
Molecular Weight (calculated)
32343.9 Da
IEP (calculated)
8.668
GRAVY (calculated)
-0.374
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSFSPSLS SLVPLLVSLF IVVCAAGNFN QDFQITWGDG RAKILNNANL LTLSLDKASG SGFQSKNEYL FGKIDMQLKL VPGNSAGTVT AYYLSSKGST
101: WDEIDFEFLG NLSGDPYILH TNVFSQGKGN REQQFYLWFD PTADFHTYSI LWNPQRIVFS VDGTPIREFK NLESIGVPFP KRQPMRIYSS LWNADDWATR
201: GGRIKTDWSK APFTASYRNF NANACVWNRG KSTCKSNSPS SNAWLSQELD STAQQRLSWV QKNYMIYNYC SDKNRFAQGL PLECTHS
101: WDEIDFEFLG NLSGDPYILH TNVFSQGKGN REQQFYLWFD PTADFHTYSI LWNPQRIVFS VDGTPIREFK NLESIGVPFP KRQPMRIYSS LWNADDWATR
201: GGRIKTDWSK APFTASYRNF NANACVWNRG KSTCKSNSPS SNAWLSQELD STAQQRLSWV QKNYMIYNYC SDKNRFAQGL PLECTHS
001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
Arabidopsis Description
XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.