CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26853	Soybean	vacuole	96.9	94.93
KRH25426	Soybean	extracellular	86.9	84.56
KRH56088	Soybean	vacuole	85.86	83.84
VIT_12s0134g00160.t01	Wine grape	extracellular	79.31	77.7
PGSC0003DMT400067358	Potato	extracellular	77.59	76.01
Solyc07g052980.2.1	Tomato	extracellular	77.24	75.68
AT4G03210.1	Thale cress	extracellular	73.1	73.1
CDY22110	Canola	extracellular	72.07	72.07
Bra000840.1-P	Field mustard	extracellular	71.72	71.72
CDY53771	Canola	extracellular	71.72	71.72
CDY21985	Canola	extracellular	71.72	71.72
CDX90896	Canola	extracellular	71.03	71.03
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	62.76	68.16
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	61.72	66.3
Bra034193.1-P	Field mustard	cytosol	71.03	59.88
EER91282	Sorghum	extracellular, vacuole	59.31	53.42
EES11493	Sorghum	extracellular, vacuole	59.31	52.92
Zm00001d002193_P003	Maize	extracellular, vacuole	60.34	51.93
KRH58172	Soybean	extracellular, vacuole	51.03	50.86
KRH04364	Soybean	extracellular	51.03	50.68
KRH31558	Soybean	nucleus	47.93	50.36
KRH37378	Soybean	nucleus	45.86	50.0
KRH02893	Soybean	extracellular	48.97	49.82
KRH02890	Soybean	extracellular	48.97	49.82
KRH19005	Soybean	vacuole	48.97	49.82
KRH19136	Soybean	nucleus	48.62	49.82
KRG97361	Soybean	nucleus	47.59	49.46
KRH28311	Soybean	extracellular, vacuole	50.34	49.16
KRH19003	Soybean	extracellular	48.62	49.13
KRH77174	Soybean	extracellular	50.0	48.99
KRH19002	Soybean	extracellular	47.59	48.42
KRH02892	Soybean	extracellular	47.59	48.08
KRH58823	Soybean	extracellular, nucleus	46.9	48.06
KRH42721	Soybean	extracellular, nucleus	46.9	48.06
KRH06776	Soybean	endoplasmic reticulum	48.28	47.46
KRG94750	Soybean	endoplasmic reticulum	48.28	47.46
KRH02894	Soybean	endoplasmic reticulum, extracellular	47.24	46.92
KRH19006	Soybean	vacuole	46.55	46.08
KRH02895	Soybean	cytosol	46.55	46.08
KRH02889	Soybean	extracellular	46.21	46.05
KRH41530	Soybean	nucleus	44.48	45.58
KRH70105	Soybean	nucleus	48.28	45.31
KRH59064	Soybean	extracellular	45.52	44.59
KRH42944	Soybean	extracellular	45.17	44.56
KRG91233	Soybean	extracellular	46.21	44.52
KRH35587	Soybean	extracellular	46.21	44.37
KRH39331	Soybean	nucleus	43.79	43.94
KRG94748	Soybean	extracellular, vacuole	38.97	43.63
KRH76320	Soybean	nucleus	43.1	43.25
KRH35625	Soybean	vacuole	43.79	42.91
KRH12375	Soybean	extracellular	46.21	42.41
KRG91154	Soybean	extracellular	42.76	41.89
KRH06775	Soybean	endoplasmic reticulum	49.31	41.45
KRG98913	Soybean	vacuole	40.34	40.62
KRH73676	Soybean	extracellular	39.31	40.28
KRH14468	Soybean	extracellular	39.66	39.93

Protein Annotations

EntrezGene:100801567	Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A0R0GWA8	EMBL:ACUP02008415	InterPro:Beta_glucanase
InterPro:ConA-like_dom_sf	InterPro:GH16	EnsemblPlantsGene:GLYMA_13G304400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	EnsemblPlants:KRH22496	ProteinID:KRH22496	ProteinID:KRH22496.1	PFAM:PF00722
PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF11
SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0001B6366F	InterPro:XET_C	InterPro:XTH	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:40133247..40135587

Molecular Weight (calculated)

32917.7 Da

IEP (calculated)

6.135

GRAVY (calculated)

-0.329

Length

290 amino acids

Sequence
(BLAST)

001: MSKMLGVFVG LLLLVGLAAS AKFDELFQPS WAMDHFIHEG ELLKLKLDNY SGAGFGSKSK YMFGKVTIQL KLVEGDSAGT VTAFYMSSDG PTHNEFDFEF
101: LGNTTGEPYS VQTNVYVNGV GNREQRLNLW FDPTKDFHTY SIFWNQRQVV FLVDETPIRV HTNLEHKGIP FPKDQAMGVY SSIWNADDWA TQGGRVKTDW
201: SHAPFVATYK DFQIDACACP VPVTSADSAK NCSSSEDKKY WWDEPTLSEL NLHQSHQLMW VRANHMVYDY CADTARFPVI PAECVHHRHH

Best Arabidopsis Sequence Match ( AT4G03210.1 )
(BLAST)

001: MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL

Arabidopsis Description

XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.