Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000840.1-P | Field mustard | extracellular | 91.38 | 91.38 |
| CDY21985 | Canola | extracellular | 91.38 | 91.38 |
| CDY53771 | Canola | extracellular | 91.03 | 91.03 |
| CDX90896 | Canola | extracellular | 90.69 | 90.69 |
| CDY22110 | Canola | extracellular | 90.69 | 90.69 |
| Bra034193.1-P | Field mustard | cytosol | 87.59 | 73.84 |
| KRH22496 | Soybean | extracellular | 73.1 | 73.1 |
| KRH26853 | Soybean | vacuole | 72.76 | 71.28 |
| VIT_12s0134g00160.t01 | Wine grape | extracellular | 69.66 | 68.24 |
| Solyc07g052980.2.1 | Tomato | extracellular | 69.31 | 67.91 |
| KRH25426 | Soybean | extracellular | 69.31 | 67.45 |
| PGSC0003DMT400067358 | Potato | extracellular | 68.28 | 66.89 |
| KRH56088 | Soybean | vacuole | 68.28 | 66.67 |
| GSMUA_Achr9P29980_001 | Banana | extracellular, vacuole | 58.97 | 64.04 |
| GSMUA_Achr6P19100_001 | Banana | extracellular, vacuole | 57.93 | 62.22 |
| EER91282 | Sorghum | extracellular, vacuole | 55.17 | 49.69 |
| EES11493 | Sorghum | extracellular, vacuole | 55.17 | 49.23 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 48.28 | 47.78 |
| AT4G30270.1 | Thale cress | extracellular | 43.79 | 47.21 |
| Zm00001d002193_P003 | Maize | extracellular, vacuole | 54.83 | 47.18 |
| AT5G65730.1 | Thale cress | extracellular | 47.24 | 46.92 |
| AT5G57560.1 | Thale cress | extracellular | 45.52 | 46.48 |
| AT4G37800.1 | Thale cress | extracellular, vacuole | 46.9 | 46.42 |
| AT5G57550.1 | Thale cress | extracellular | 45.17 | 46.13 |
| AT2G06850.1 | Thale cress | extracellular | 46.9 | 45.95 |
| AT3G23730.1 | Thale cress | extracellular, vacuole | 45.86 | 45.7 |
| AT4G14130.1 | Thale cress | extracellular | 45.52 | 45.67 |
| AT4G25810.1 | Thale cress | extracellular | 44.48 | 45.1 |
| AT5G57540.1 | Thale cress | extracellular | 43.45 | 44.37 |
| AT5G57530.1 | Thale cress | extracellular | 42.76 | 43.51 |
| AT2G14620.1 | Thale cress | vacuole | 44.83 | 43.48 |
| AT1G11545.1 | Thale cress | extracellular | 45.17 | 42.95 |
| AT4G25820.1 | Thale cress | extracellular | 42.41 | 42.86 |
| AT4G28850.1 | Thale cress | extracellular | 42.07 | 41.78 |
| AT2G18800.1 | Thale cress | extracellular | 42.41 | 40.33 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:828024 | UniProt:A0A178V222 | ProteinID:AAD14449.1 | EMBL:AB493675 |
| ProteinID:AEE82292.1 | ArrayExpress:AT4G03210 | EnsemblPlantsGene:AT4G03210 | RefSeq:AT4G03210 | TAIR:AT4G03210 | RefSeq:AT4G03210-TAIR-G |
| EnsemblPlants:AT4G03210.1 | TAIR:AT4G03210.1 | EMBL:AY044333 | EMBL:AY072353 | EMBL:AY085753 | Unigene:At.3932 |
| EMBL:BT002199 | InterPro:Beta_glucanase | UniProt:C0SVH2 | ProteinID:CAB77806.1 | InterPro:ConA-like_dom_sf | InterPro:GH16 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | RefSeq:NP_192230.1 |
| ProteinID:OAO99915.1 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000025 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020121 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00737 | PFscan:PS51762 | PANTHER:PTHR31062 |
| PANTHER:PTHR31062:SF11 | UniProt:Q8LDW9 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | UniParc:UPI00000488EF | InterPro:XET_C |
| InterPro:XTH | Symbol:XTH9 | : | : | : | : |
Description
XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
Coordinates
chr4:+:1415617..1417444
Molecular Weight (calculated)
33143.1 Da
IEP (calculated)
4.914
GRAVY (calculated)
-0.291
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.