CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22496	Soybean	extracellular	94.93	96.9
KRH25426	Soybean	extracellular	84.8	84.23
KRH56088	Soybean	vacuole	83.11	82.83
VIT_12s0134g00160.t01	Wine grape	extracellular	76.35	76.35
Solyc07g052980.2.1	Tomato	extracellular	74.66	74.66
PGSC0003DMT400067358	Potato	extracellular	74.32	74.32
AT4G03210.1	Thale cress	extracellular	71.28	72.76
CDY22110	Canola	extracellular	70.27	71.72
Bra000840.1-P	Field mustard	extracellular	69.93	71.38
CDY53771	Canola	extracellular	69.93	71.38
CDY21985	Canola	extracellular	69.93	71.38
CDX90896	Canola	extracellular	69.26	70.69
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	61.49	68.16
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	60.47	66.3
Bra034193.1-P	Field mustard	cytosol	69.93	60.17
EER91282	Sorghum	extracellular, vacuole	57.09	52.48
EES11493	Sorghum	extracellular, vacuole	57.09	52.0
Zm00001d002193_P003	Maize	extracellular, vacuole	58.11	51.04
KRH58172	Soybean	extracellular, vacuole	49.32	50.17
KRH04364	Soybean	extracellular	49.32	50.0
KRH02893	Soybean	extracellular	47.97	49.82
KRH02890	Soybean	extracellular	47.97	49.82
KRH19005	Soybean	vacuole	47.97	49.82
KRH31558	Soybean	nucleus	46.28	49.64
KRH37378	Soybean	nucleus	44.59	49.62
KRH19136	Soybean	nucleus	47.3	49.47
KRH28311	Soybean	extracellular, vacuole	48.99	48.82
KRH19003	Soybean	extracellular	47.3	48.78
KRG97361	Soybean	nucleus	45.95	48.75
KRH77174	Soybean	extracellular	48.31	48.31
KRH06776	Soybean	endoplasmic reticulum	47.64	47.8
KRG94750	Soybean	endoplasmic reticulum	47.64	47.8
KRH02892	Soybean	extracellular	46.28	47.74
KRH19002	Soybean	extracellular	45.95	47.72
KRH58823	Soybean	extracellular, nucleus	45.61	47.7
KRH42721	Soybean	extracellular, nucleus	45.61	47.7
KRH02894	Soybean	endoplasmic reticulum, extracellular	46.28	46.92
KRH70105	Soybean	nucleus	47.97	45.95
KRH02895	Soybean	cytosol	45.27	45.73
KRH41530	Soybean	nucleus	43.24	45.23
KRH19006	Soybean	vacuole	44.59	45.05
KRH02889	Soybean	extracellular	44.26	45.02
KRG91233	Soybean	extracellular	45.61	44.85
KRH35587	Soybean	extracellular	45.61	44.7
KRG94748	Soybean	extracellular, vacuole	38.51	44.02
KRH39331	Soybean	nucleus	42.91	43.94
KRH59064	Soybean	extracellular	43.92	43.92
KRH42944	Soybean	extracellular	43.58	43.88
KRH76320	Soybean	nucleus	42.23	43.25
KRH35625	Soybean	vacuole	42.91	42.91
KRH12375	Soybean	extracellular	44.93	42.09
KRG91154	Soybean	extracellular	41.89	41.89
KRH06775	Soybean	endoplasmic reticulum	48.31	41.45
KRG98913	Soybean	vacuole	39.19	40.28
KRH73676	Soybean	extracellular	37.5	39.22
KRH14468	Soybean	extracellular	37.84	38.89

Protein Annotations

EntrezGene:100527891	Gene3D:2.60.120.200	MapMan:50.2.4	EMBL:ACUP02007753	InterPro:ConA-like_dom_sf	InterPro:GH16
EnsemblPlantsGene:GLYMA_12G197600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787
GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	UniProt:I1LU96
InterPro:IPR000757	EnsemblPlants:KRH26853	ProteinID:KRH26853	ProteinID:KRH26853.1	PFAM:PF00722	PFAM:PF06955
PIRSF:PIRSF005604	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF11	SUPFAM:SSF49899	SignalP:SignalP-noTM
UniParc:UPI000233C438	InterPro:XET_C	InterPro:XTH	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:+:35879106..35881779

Molecular Weight (calculated)

33675.5 Da

IEP (calculated)

6.098

GRAVY (calculated)

-0.380

Length

296 amino acids

Sequence
(BLAST)

001: MSKMLGVFVG LLLVGLAASA KFDELFQPSW AMDHFIHEGE LLKLKLDNYS GAGFGSKSKY MFGKVTILLK LVEGDSAGTV TAFYMSSDGP THNEFDFEFL
101: GNTTGEPYSV QTNVYVNGVG NREQRLNLWF DPTKDFHTYS IFWNQRQVVF LVDETPIRVH TNLEHKGIPF PKDQAMGVYS SIWNADDWAT QGGRVKTDWS
201: HAPFVATYKD FQIDACECPV PVTSADSAKK CSSSEDNKYW WDQPTLSELN LHQSHQLMWV RANHMLYDYC ADTARFPVVP AECVHHPHHS RETNYH

Best Arabidopsis Sequence Match ( AT4G03210.1 )
(BLAST)

001: MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL

Arabidopsis Description

XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.