CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91282	Sorghum	extracellular, vacuole	99.08	100.0
Zm00001d002193_P003	Maize	extracellular, vacuole	92.0	88.72
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	57.85	70.41
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	56.0	67.41
KRH22496	Soybean	extracellular	52.92	59.31
PGSC0003DMT400067358	Potato	extracellular	52.0	57.09
KRH26853	Soybean	vacuole	52.0	57.09
VIT_12s0134g00160.t01	Wine grape	extracellular	51.08	56.08
KRH56088	Soybean	vacuole	51.08	55.89
Solyc07g052980.2.1	Tomato	extracellular	50.77	55.74
CDY21985	Canola	extracellular	49.54	55.52
CDY53771	Canola	extracellular	49.54	55.52
KRH25426	Soybean	extracellular	50.77	55.37
Bra000840.1-P	Field mustard	extracellular	49.23	55.17
AT4G03210.1	Thale cress	extracellular	49.23	55.17
CDY22110	Canola	extracellular	49.23	55.17
CDX90896	Canola	extracellular	49.23	55.17
EER90302	Sorghum	extracellular	41.54	46.88
EER88885	Sorghum	extracellular	41.85	46.58
Bra034193.1-P	Field mustard	cytosol	48.92	46.22
OQU83588	Sorghum	extracellular	42.77	45.87
EER90303	Sorghum	extracellular, golgi, vacuole	41.85	45.18
EES13577	Sorghum	extracellular	37.54	42.66
KXG24787	Sorghum	vacuole	38.15	42.32
KXG36371	Sorghum	extracellular	40.92	41.69
EES12802	Sorghum	endoplasmic reticulum, extracellular	36.31	41.55
EES13579	Sorghum	vacuole	36.62	40.89
EES04926	Sorghum	extracellular, vacuole	36.31	40.0
EES04929	Sorghum	extracellular, vacuole	35.69	40.0
OQU75596	Sorghum	cytosol, extracellular, plastid	19.69	39.51
EER89799	Sorghum	vacuole	35.08	38.78
EER88886	Sorghum	golgi	37.54	38.73
EES12801	Sorghum	extracellular	35.08	37.62
EES11382	Sorghum	extracellular, vacuole	34.15	37.25
EES13578	Sorghum	extracellular	31.38	35.54

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EntrezGene:8066849	InterPro:Beta_glucanase	UniProt:C5YGN0	InterPro:ConA-like_dom_sf
EnsemblPlants:EES11493	ProteinID:EES11493	ProteinID:EES11493.1	InterPro:GH16	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF11	EnsemblPlantsGene:SORBI_3006G228100	SUPFAM:SSF49899
unigene:Sbi.3617	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A86D2E	InterPro:XET_C	RefSeq:XP_002447165.1
InterPro:XTH	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:57269895..57271835

Molecular Weight (calculated)

35673.3 Da

IEP (calculated)

5.317

GRAVY (calculated)

-0.357

Length

325 amino acids

Sequence
(BLAST)

001: MALWNGGGGA FPAAAVLVAA AVAALLGAGV GATKFDDVVQ PSWANDHMVY DGDLLKLRLD ANSGGGFVSR SKFLYGKASA DLKLVPGDSA GVVTAFYLSS
101: AGDKHNEFDF EFLGNVTGEP YLVQTNLYID GVGNREQRID LWFDPTADFH TYAVLWNPSQ VVFMVDDTPI RVYENRQNAT VHGHHHRSNN ATNASTSTAS
201: PPPFPGPQPM AVYSSIWNAD DWATQGGRVK TDWSHAPFEA TFREVRVDGC AWAANATDGD AGEVRRCSET SWGKEGRYWW KEKEMSELSV HQSHQLVWAR
301: AHHLVYDYCV DTDRFPVQPP ECAGR

Best Arabidopsis Sequence Match ( AT4G03210.1 )
(BLAST)

001: MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL

Arabidopsis Description

XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.