CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009309_P001	Maize	extracellular, vacuole	81.51	85.92
Zm00001d014613_P001	Maize	plasma membrane	85.27	85.86
Os06t0696400-01	Rice	extracellular	84.93	84.64
TraesCS7A01G427600.1	Wheat	extracellular	82.53	83.39
HORVU7Hr1G098440.2	Barley	extracellular	81.51	83.22
TraesCS7D01G419900.1	Wheat	extracellular	81.16	82.58
TraesCS7B01G327700.1	Wheat	extracellular	81.85	82.41
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	48.97	74.09
GSMUA_Achr3P05220_001	Banana	cytosol	52.4	73.56
GSMUA_Achr9P13820_001	Banana	cytosol	51.37	71.77
GSMUA_Achr7P16430_001	Banana	cytosol	51.03	69.95
GSMUA_Achr10P...	Banana	cytosol	47.6	69.85
GSMUA_Achr5P21880_001	Banana	cytosol	50.34	69.01
EER90303	Sorghum	extracellular, golgi, vacuole	69.18	67.11
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	43.84	64.97
CDY02738	Canola	extracellular, nucleus, vacuole	44.52	60.47
VIT_11s0052g01230.t01	Wine grape	cytosol	56.85	59.71
CDY25904	Canola	extracellular	57.88	59.51
CDY67778	Canola	extracellular	57.53	59.15
Bra020434.1-P	Field mustard	extracellular	57.53	58.95
Bra002722.1-P	Field mustard	extracellular	57.19	58.8
AT5G57550.1	Thale cress	extracellular	56.85	58.45
CDY67779	Canola	extracellular	57.19	58.39
Bra002723.1-P	Field mustard	extracellular	57.19	58.39
AT5G57530.1	Thale cress	extracellular	56.85	58.25
AT5G57540.1	Thale cress	extracellular	56.51	58.1
PGSC0003DMT400048242	Potato	extracellular	55.48	58.06
CDY11863	Canola	extracellular	56.85	58.04
Solyc07g006870.2.1	Tomato	extracellular, vacuole	55.82	57.8
Bra013923.1-P	Field mustard	extracellular	56.16	57.75
CDY69806	Canola	extracellular	56.16	57.75
CDX88627	Canola	extracellular	56.51	57.69
Bra020436.1-P	Field mustard	extracellular	55.82	57.6
CDY67488	Canola	extracellular	55.82	57.6
AT4G25820.1	Thale cress	extracellular	56.51	57.49
EER90302	Sorghum	extracellular	56.51	57.29
CDX92733	Canola	extracellular	55.48	56.64
CDY50186	Canola	extracellular	55.14	56.29
Bra019141.1-P	Field mustard	extracellular	55.14	56.29
EES12802	Sorghum	endoplasmic reticulum, extracellular	52.74	54.23
Bra006814.1-P	Field mustard	extracellular	55.82	51.1
KXG24787	Sorghum	vacuole	50.0	49.83
OQU83588	Sorghum	extracellular	51.37	49.51
EES12801	Sorghum	extracellular	48.63	46.86
PGSC0003DMT400048240	Potato	golgi	54.79	46.78
EES13579	Sorghum	vacuole	46.23	46.39
EER88886	Sorghum	golgi	49.66	46.03
Solyc07g006850.1.1	Tomato	golgi	53.77	45.91
EES13577	Sorghum	extracellular	44.86	45.8
EES04926	Sorghum	extracellular, vacuole	45.89	45.42
EER89799	Sorghum	vacuole	45.21	44.9
EES04929	Sorghum	extracellular, vacuole	44.18	44.48
OQU75596	Sorghum	cytosol, extracellular, plastid	24.32	43.83
EES13578	Sorghum	extracellular	42.81	43.55
EER91282	Sorghum	extracellular, vacuole	46.58	42.24
EES11493	Sorghum	extracellular, vacuole	46.58	41.85
EES11382	Sorghum	extracellular, vacuole	42.47	41.61
KXG36371	Sorghum	extracellular	44.86	41.07

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EntrezGene:8065132	UniProt:C5Z8T2	InterPro:ConA-like_dom_sf	EnsemblPlants:EER88885
ProteinID:EER88885	ProteinID:EER88885.1	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF42	EnsemblPlantsGene:SORBI_3010G246400	SUPFAM:SSF49899
unigene:Sbi.18155	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A89243	InterPro:XET_C	RefSeq:XP_002437518.1
InterPro:XTH	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:58611150..58612443

Molecular Weight (calculated)

32530.3 Da

IEP (calculated)

9.349

GRAVY (calculated)

-0.430

Length

292 amino acids

Sequence
(BLAST)

001: MRSTALVAFV AVACLAAVAH GGNFYKDTEM TWGQGRGKVV DGGRGLDLTL DRTSGSGFQS KSEYLFGKID MQIKLVPGNS AGTVTTFYLS SQGPTHDEID
101: FEFLGNVSGE PYTLHTNVFT GGQGQREQQF RLWFDPTKDF HTYSVVWNPQ HVIFAVDGTP IRDFKNHEAR GVGFPRTQPM RLYASLWNAD DWATQGGRVK
201: ADWTQAPFVA SFRGFSADAC VWANGKQQCP VGTMAAAATG GRRGGPGSWW NQQLSDMSYR RMRWVQRKFM IYNYCTDAKR FPQGVPAECK LR

Best Arabidopsis Sequence Match ( AT5G57560.1 )
(BLAST)

001: MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA

Arabidopsis Description

XTH22Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQX4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.