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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol, extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019141.1-P Field mustard extracellular 100.0 100.0
CDX92733 Canola extracellular 98.6 98.6
CDY69806 Canola extracellular 87.41 88.03
AT4G25820.1 Thale cress extracellular 83.22 82.93
CDY67488 Canola extracellular 78.67 79.51
CDY67779 Canola extracellular 78.67 78.67
CDX88627 Canola extracellular 77.62 77.62
CDY11863 Canola extracellular 77.62 77.62
CDY02738 Canola extracellular, nucleus, vacuole 56.64 75.35
GSMUA_Achr4P02240_001 Banana cytosol, mitochondrion, nucleus 45.45 67.36
GSMUA_Achr10P... Banana cytosol 46.15 66.33
GSMUA_Achr3P05220_001 Banana cytosol 46.5 63.94
GSMUA_Achr5P21880_001 Banana cytosol 46.85 62.91
GSMUA_Achr9P13820_001 Banana cytosol 45.1 61.72
GSMUA_Achr7P16430_001 Banana cytosol 44.76 60.09
HORVU7Hr1G098320.3 Barley vacuole 59.79 59.17
TraesCS7A01G426900.1 Wheat extracellular 59.09 59.09
TraesCS7D01G419300.1 Wheat extracellular 59.44 58.62
HORVU0Hr1G022110.1 Barley extracellular, vacuole 59.79 58.56
TraesCS7A01G426100.1 Wheat vacuole 59.09 58.48
TraesCS7B01G327200.1 Wheat extracellular 58.39 58.39
TraesCS7A01G427000.1 Wheat extracellular 58.39 58.39
TraesCS7D01G419100.1 Wheat extracellular 58.74 58.33
CDY59999 Canola extracellular 50.35 58.3
Os06t0697000-02 Rice extracellular 59.09 58.28
TraesCS7B01G326900.1 Wheat extracellular 58.74 58.13
CDY67778 Canola extracellular 57.69 58.1
CDY25904 Canola extracellular 57.69 58.1
TraesCS7B01G327000.1 Wheat extracellular 59.09 57.88
CDY61576 Canola vacuole 56.64 57.86
TraesCS7D01G418700.1 Wheat cytosol, mitochondrion, nucleus 45.1 57.85
TraesCS7A01G426700.1 Wheat extracellular 58.39 57.79
TraesCS7D01G419200.1 Wheat extracellular 57.69 57.69
TraesCS7A01G426600.1 Wheat vacuole 58.39 57.59
HORVU7Hr1G098260.1 Barley vacuole 58.74 57.53
GSMUA_Achr3P05200_001 Banana cytosol, plastid, vacuole 39.51 57.36
CDX89393 Canola extracellular 57.34 57.14
CDY25903 Canola extracellular 51.75 56.92
CDY14905 Canola extracellular 53.85 56.83
CDX94413 Canola extracellular 56.99 56.79
PGSC0003DMT400048242 Potato extracellular 55.24 56.63
EER90303 Sorghum extracellular, golgi, vacuole 59.44 56.48
CDY66832 Canola extracellular 53.5 56.46
CDY27126 Canola extracellular 56.99 56.4
CDY28174 Canola extracellular 55.59 56.38
CDY39193 Canola extracellular 53.5 56.25
CDY67487 Canola extracellular 51.05 56.15
CDX68640 Canola extracellular 55.24 56.03
Solyc07g006870.2.1 Tomato extracellular, vacuole 55.24 56.03
CDX72228 Canola extracellular 53.85 55.2
EER88885 Sorghum extracellular 56.29 55.14
TraesCS7D01G419900.1 Wheat extracellular 55.24 55.05
Zm00001d014617_P001 Maize extracellular 57.34 55.03
HORVU7Hr1G098440.2 Barley extracellular 54.9 54.9
CDY59998 Canola extracellular 54.2 54.77
TraesCS7B01G327700.1 Wheat extracellular 55.24 54.48
TraesCS7A01G427600.1 Wheat extracellular 54.9 54.33
Os06t0696400-01 Rice extracellular 55.59 54.27
CDX72227 Canola extracellular 51.05 53.87
Zm00001d014613_P001 Maize plasma membrane 54.55 53.79
Zm00001d009309_P001 Maize extracellular, vacuole 51.05 52.71
TraesCS7D01G418600.1 Wheat vacuole 57.69 51.72
CDY49308 Canola extracellular 55.24 50.32
CDY03539 Canola endoplasmic reticulum, extracellular 53.5 49.04
CDY12366 Canola extracellular 48.6 48.94
CDY02741 Canola extracellular 49.65 48.3
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 54.2 47.4
CDY35228 Canola extracellular 47.2 46.23
CDY06861 Canola extracellular 46.85 45.89
CDY69237 Canola extracellular 46.15 44.75
CDX69621 Canola vacuole 45.8 44.71
CDY09832 Canola vacuole 45.8 44.71
CDX93096 Canola extracellular 45.8 44.41
CDY45623 Canola extracellular 43.71 43.86
CDY08756 Canola extracellular 43.71 43.86
CDX72656 Canola extracellular, vacuole 44.76 43.84
CDY31620 Canola extracellular, vacuole 44.76 43.69
CDX78542 Canola vacuole 45.45 43.62
CDX70524 Canola vacuole 45.1 43.29
HORVU7Hr1G098280.1 Barley extracellular, mitochondrion, vacuole 59.09 42.25
CDX71167 Canola vacuole 43.71 42.09
CDY21985 Canola extracellular 42.31 41.72
CDY53771 Canola extracellular 42.31 41.72
CDY22110 Canola extracellular 42.31 41.72
CDX90896 Canola extracellular 41.96 41.38
CDY49788 Canola extracellular 43.01 41.14
CDX97967 Canola extracellular 43.01 41.14
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078IJL2UniProt:A0A078IJL2InterPro:Beta_glucanase
EnsemblPlants:CDY50186ProteinID:CDY50186ProteinID:CDY50186.1InterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_AS
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618
GO:GO:0005623GO:GO:0005975GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0010411GO:GO:0016043GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0016798
GO:GO:0030312GO:GO:0042546GO:GO:0048046GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00096117001InterPro:IPR000757
PFAM:PF00722PFAM:PF06955PIRSF:PIRSF005604PRINTS:PR00737ScanProsite:PS01034PFscan:PS51762
PANTHER:PTHR31062PANTHER:PTHR31062:SF20SUPFAM:SSF49899SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000254114F
InterPro:XET_CInterPro:XTH::::
Description
BnaA03g47620DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078IJL2]
Coordinates
chrLK032888:-:243..1557
Molecular Weight (calculated)
32690.4 Da
IEP (calculated)
7.449
GRAVY (calculated)
-0.389
Length
286 amino acids
Sequence
(BLAST)
001: MAVPASKKPL LLSFLWFGLF VAAASAGSFY ESFDITWGDG RADIYETGQL LTCTLDKVSG SGFQSKKEYL YGKIDMKLKL VAGNSAGTVT AYYLSSKGAT
101: WDEIDFEFLG NVTGQPYTIH TNVFTGGKGD REMQFRLWFD PTADFHTYTV HWNPLNIIFL VDGIPIRVFK NNEKNGVAYP TSQPMKIYSS LWEADDWATQ
201: GGRVKTDWSN APFRAHYRNF DDKNSCSRTS NLTWVTCDGN KNSWMWTTLN NHQIGQMNWV QKEFLIYNYC TDYKRFPQGF AKECYL
Best Arabidopsis Sequence Match ( AT4G25820.1 )
(BLAST)
001: MACFATKQPL LLSLLLAIGF FVVAASAGNF YESFDITWGN GRANIFENGQ LLTCTLDKVS GSGFQSKKEY LFGKIDMKLK LVAGNSAGTV TAYYLSSKGT
101: AWDEIDFEFL GNRTGHPYTI HTNVFTGGKG DREMQFRLWF DPTADFHTYT VHWNPVNIIF LVDGIPIRVF KNNEKNGVAY PKNQPMRIYS SLWEADDWAT
201: EGGRVKIDWS NAPFKASYRN FNDQSSCSRT SSSKWVTCEP NSNSWMWTTL NPAQYGKMMW VQRDFMIYNY CTDFKRFPQG LPKECKL
Arabidopsis Description
XTH14Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UTG4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.