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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol, extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011179.1-P Field mustard extracellular 100.0 100.0
CDX68640 Canola extracellular 98.94 98.94
CDY14905 Canola extracellular 90.78 94.46
CDY66832 Canola extracellular 89.36 92.99
CDX72228 Canola extracellular 91.13 92.11
AT4G30270.1 Thale cress extracellular 87.59 91.82
CDY39193 Canola extracellular 87.94 91.18
CDX72227 Canola extracellular 79.79 83.03
CDY03539 Canola endoplasmic reticulum, extracellular 89.36 80.77
CDY59999 Canola extracellular 63.83 72.87
CDY25903 Canola extracellular 65.6 71.15
CDY67487 Canola extracellular 65.6 71.15
CDX89393 Canola extracellular 71.63 70.38
CDX94413 Canola extracellular 71.28 70.03
VIT_11s0052g01220.t01 Wine grape extracellular 67.73 67.02
KRH19136 Soybean nucleus 67.02 66.78
VIT_11s0052g01250.t01 Wine grape extracellular 67.02 65.4
KRH37378 Soybean nucleus 60.99 64.66
PGSC0003DMT400036329 Potato extracellular 63.48 63.48
CDY25904 Canola extracellular 63.83 63.38
CDY67778 Canola extracellular 63.48 63.03
Solyc07g009380.2.1 Tomato extracellular, nucleus 60.99 62.55
CDY02741 Canola extracellular 64.54 61.9
Solyc05g046290.2.1 Tomato extracellular 62.77 61.46
CDY27126 Canola extracellular 60.28 58.82
CDY59998 Canola extracellular 58.51 58.3
CDY61576 Canola vacuole 57.8 58.21
CDY49308 Canola extracellular 64.54 57.96
CDY69806 Canola extracellular 57.45 57.04
CDY67779 Canola extracellular 57.8 56.99
CDX88627 Canola extracellular 57.45 56.64
CDY67488 Canola extracellular 56.74 56.54
CDY11863 Canola extracellular 57.09 56.29
CDY02738 Canola extracellular, nucleus, vacuole 42.55 55.81
KRH12375 Soybean extracellular 62.41 55.7
CDY50186 Canola extracellular 56.38 55.59
CDX92733 Canola extracellular 56.03 55.24
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 62.41 53.82
CDY12366 Canola extracellular 51.06 50.7
CDY09832 Canola vacuole 51.42 49.49
CDX69621 Canola vacuole 51.42 49.49
CDX78542 Canola vacuole 52.13 49.33
CDX70524 Canola vacuole 51.77 48.99
CDX93096 Canola extracellular 49.29 47.12
CDY69237 Canola extracellular 48.94 46.78
CDY22110 Canola extracellular 47.87 46.55
CDX90896 Canola extracellular 47.87 46.55
CDY21985 Canola extracellular 47.87 46.55
CDY53771 Canola extracellular 47.87 46.55
CDY08756 Canola extracellular 46.1 45.61
CDY45623 Canola extracellular 46.1 45.61
CDY35228 Canola extracellular 47.16 45.55
CDY06861 Canola extracellular 46.81 45.21
CDX72656 Canola extracellular, vacuole 43.97 42.47
CDY31620 Canola extracellular, vacuole 43.62 41.98
CDY49788 Canola extracellular 43.26 40.8
CDX97967 Canola extracellular 42.91 40.47
CDX71167 Canola vacuole 42.55 40.4
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078GSK1UniProt:A0A078GSK1EnsemblPlants:CDY28174
ProteinID:CDY28174ProteinID:CDY28174.1InterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_ASGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623
GO:GO:0005975GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411
GO:GO:0016043GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0016798GO:GO:0030312
GO:GO:0042546GO:GO:0048046GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00039889001InterPro:IPR000757PFAM:PF00722
PFAM:PF06955PIRSF:PIRSF005604ScanProsite:PS01034PFscan:PS51762PANTHER:PTHR31062PANTHER:PTHR31062:SF20
SUPFAM:SSF49899SignalP:SignalP-noTMUniParc:UPI0002546F7EInterPro:XET_CInterPro:XTHSEG:seg
Description
BnaA01g06750DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078GSK1]
Coordinates
chrLK032216:-:112004..113324
Molecular Weight (calculated)
31839.5 Da
IEP (calculated)
8.809
GRAVY (calculated)
-0.456
Length
282 amino acids
Sequence
(BLAST)
001: MSPFKIFLFS ALLAAAFLAS AADFNSDVNV AWGNGRGKIL NNGQLLTLTL DKSSGSGFQS KTEYLFGKID MQIKLVPGNS AGTVTTFYLK SEGSTWDEID
101: FEFLGNMTGD PYTLHTNVYT QGKGDKEQQF HLWFDPTANF HTYSILWNPQ RIILTVDDTP IREFKNSESL GVLFPKSKPM RMYASLWNAD DWATRGGLVK
201: TDWSKAPFTA SYRNIKIDGC AHSNGRSSCT STKPTSTWYT QEMDSTSQAR LRWVQKNYMI YNYCTDTKRF PQGIPRECAT RS
Best Arabidopsis Sequence Match ( AT5G57550.1 )
(BLAST)
001: MDRSTFILSL LFTLTVSTTT LFSPVFAGTF DTEFDITWGD GRGKVLNNGE LLTLSLDRAS GSGFQTKKEY LFGKIDMQLK LVPGNSAGTV TAYYLKSKGD
101: TWDEIDFEFL GNLTGDPYTM HTNVYTQGKG DREQQFHLWF DPTADFHTYS VLWNPHHIVF MVDDIPVREF KNLQHMGIQY PKLQPMRLYS SLWNADQWAT
201: RGGLVKTDWS KAPFTASYRN FRADACVSSG GRSSCPAGSP RWFSQRLDLT AEDKMRVVQR KYMIYNYCTD TKRFPQGFPK ECRH
Arabidopsis Description
XTH25Probable xyloglucan endotransglucosylase/hydrolase protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q38907]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.