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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67487 Canola extracellular 83.67 94.62
Bra020433.1-P Field mustard extracellular 82.65 93.46
CDY59999 Canola extracellular 77.55 92.31
CDY25903 Canola extracellular 80.61 91.15
CDX89393 Canola extracellular 71.43 73.17
CDX94413 Canola extracellular 71.09 72.82
CDY39193 Canola extracellular 60.54 65.44
CDX68640 Canola extracellular 61.9 64.54
CDY28174 Canola extracellular 61.9 64.54
CDX72228 Canola extracellular 61.22 64.52
CDY66832 Canola extracellular 59.18 64.21
CDY14905 Canola extracellular 58.84 63.84
KRH19136 Soybean nucleus 59.18 61.48
VIT_11s0052g01220.t01 Wine grape extracellular 58.84 60.7
CDX72227 Canola extracellular 55.1 59.78
PGSC0003DMT400036329 Potato extracellular 55.78 58.16
CDY25904 Canola extracellular 55.44 57.39
KRH37378 Soybean nucleus 51.7 57.14
CDY67778 Canola extracellular 55.1 57.04
Solyc05g046290.2.1 Tomato extracellular 55.78 56.94
VIT_11s0052g01250.t01 Wine grape extracellular 55.44 56.4
CDY03539 Canola endoplasmic reticulum, extracellular 59.18 55.77
Solyc07g009380.2.1 Tomato extracellular, nucleus 51.02 54.55
CDY69806 Canola extracellular 50.34 52.11
CDY67488 Canola extracellular 50.0 51.94
CDY11863 Canola extracellular 50.34 51.75
CDY02738 Canola extracellular, nucleus, vacuole 37.76 51.63
CDY59998 Canola extracellular 49.66 51.59
CDY67779 Canola extracellular 50.0 51.4
CDX88627 Canola extracellular 50.0 51.4
CDY49308 Canola extracellular 54.08 50.64
CDY27126 Canola extracellular 49.32 50.17
CDY61576 Canola vacuole 47.62 50.0
CDY50186 Canola extracellular 48.3 49.65
CDX92733 Canola extracellular 47.96 49.3
KRH12375 Soybean extracellular 51.7 48.1
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 52.72 47.4
CDY12366 Canola extracellular 45.24 46.83
CDX69621 Canola vacuole 41.16 41.3
CDY09832 Canola vacuole 41.16 41.3
CDY06861 Canola extracellular 40.14 40.41
CDX78542 Canola vacuole 40.82 40.27
CDY35228 Canola extracellular 39.8 40.07
CDX70524 Canola vacuole 40.48 39.93
CDY45623 Canola extracellular 38.1 39.3
CDY08756 Canola extracellular 38.1 39.3
CDX93096 Canola extracellular 39.12 38.98
CDX72656 Canola extracellular, vacuole 38.44 38.7
CDY69237 Canola extracellular 38.78 38.64
CDY31620 Canola extracellular, vacuole 38.44 38.57
CDY22110 Canola extracellular 37.76 38.28
CDY21985 Canola extracellular 37.76 38.28
CDY53771 Canola extracellular 37.76 38.28
CDX90896 Canola extracellular 37.41 37.93
CDY49788 Canola extracellular 36.39 35.79
CDX97967 Canola extracellular 35.71 35.12
CDX71167 Canola vacuole 35.37 35.02
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078ENJ9InterPro:Beta_glucanaseEnsemblPlants:CDY02741
ProteinID:CDY02741ProteinID:CDY02741.1InterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_ASGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623
GO:GO:0005975GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411
GO:GO:0016043GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0016798GO:GO:0030312
GO:GO:0042546GO:GO:0048046GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00114895001InterPro:IPR000757PFAM:PF00722
PFAM:PF06955PRINTS:PR00737ScanProsite:PS01034PFscan:PS51762PANTHER:PTHR31062PANTHER:PTHR31062:SF20
SUPFAM:SSF49899SignalP:SignalP-noTMUniParc:UPI0004EEFE1EInterPro:XET_CSEG:seg:
Description
BnaC02g11480D
Coordinates
chrLK031937:-:14809..15842
Molecular Weight (calculated)
33889.3 Da
IEP (calculated)
8.388
GRAVY (calculated)
-0.426
Length
294 amino acids
Sequence
(BLAST)
001: MTNNYLLPLF LSLTVISSVS ANFQKDVEIT WGDGRGQITN NGELLTLSLD KSSGSGFQSK NEYLFGKIDM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNLSGDP YTLHTNVYTQ GKGDKEQQFK LWFDPTADFH TYTILWNPQR IIFTVDGTPI REFKNMESIG TLFPKNRPMR MYSSLWNADD WATRACVWSN
201: GKSSCPDVSK QGTTGSWLSQ ELDSTAQERM RWVQRNYMIY NYCTDAKRYI YIIYNLIYIL FLKFNALTKL YNINLLNEKT KLKHINHLNP KEVQ
Best Arabidopsis Sequence Match ( AT5G57560.1 )
(BLAST)
001: MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA
Arabidopsis Description
XTH22Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQX4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.