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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024415.1-P Field mustard extracellular 98.25 98.25
CDY08756 Canola extracellular 98.25 98.25
AT5G65730.1 Thale cress extracellular 91.23 89.04
KRH04364 Soybean extracellular 74.74 72.95
KRH77174 Soybean extracellular 75.09 72.3
KRH58172 Soybean extracellular, vacuole 73.68 72.16
KRH28311 Soybean extracellular, vacuole 74.74 71.72
GSMUA_Achr3P26220_001 Banana extracellular 71.93 71.68
GSMUA_Achr8P26470_001 Banana extracellular 71.58 71.33
GSMUA_Achr8P05120_001 Banana extracellular 71.23 70.98
CDX72656 Canola extracellular, vacuole 72.63 70.89
PGSC0003DMT400055138 Potato extracellular 73.33 70.85
Solyc02g091920.2.1 Tomato nucleus 72.98 70.51
CDY31620 Canola extracellular, vacuole 72.28 70.31
GSMUA_Achr1P10380_001 Banana extracellular, vacuole 67.72 65.42
CDY09832 Canola vacuole 49.82 48.46
CDX69621 Canola vacuole 49.47 48.12
CDY53771 Canola extracellular 48.77 47.93
CDY21985 Canola extracellular 48.77 47.93
CDY22110 Canola extracellular 48.42 47.59
CDX90896 Canola extracellular 48.42 47.59
CDY39193 Canola extracellular 45.26 47.43
CDX78542 Canola vacuole 49.47 47.32
CDX70524 Canola vacuole 49.47 47.32
CDX89393 Canola extracellular 47.37 47.04
CDY02738 Canola extracellular, nucleus, vacuole 35.44 46.98
CDX72228 Canola extracellular 45.96 46.95
CDY66832 Canola extracellular 44.56 46.86
CDY25904 Canola extracellular 46.67 46.83
CDY59998 Canola extracellular 46.32 46.64
CDY14905 Canola extracellular 44.21 46.49
CDY67778 Canola extracellular 46.32 46.48
CDX94413 Canola extracellular 46.67 46.34
CDY28174 Canola extracellular 45.61 46.1
CDX68640 Canola extracellular 45.61 46.1
CDX93096 Canola extracellular 47.37 45.76
CDY61576 Canola vacuole 44.91 45.71
CDX97967 Canola extracellular 47.72 45.48
CDY69237 Canola extracellular 47.02 45.42
CDY59999 Canola extracellular 39.3 45.34
CDY49788 Canola extracellular 47.37 45.15
CDX72227 Canola extracellular 42.81 45.02
CDY67488 Canola extracellular 44.56 44.88
CDX71167 Canola vacuole 46.67 44.78
CDY25903 Canola extracellular 40.7 44.62
CDY69806 Canola extracellular 44.21 44.37
CDY67487 Canola extracellular 40.35 44.23
CDY67779 Canola extracellular 44.21 44.06
CDY27126 Canola extracellular 44.56 43.94
CDY50186 Canola extracellular 43.86 43.71
CDY11863 Canola extracellular 43.86 43.71
CDX88627 Canola extracellular 43.86 43.71
CDX92733 Canola extracellular 43.51 43.36
CDY49308 Canola extracellular 45.96 41.72
CDY03539 Canola endoplasmic reticulum, extracellular 44.56 40.71
CDY06861 Canola extracellular 41.4 40.41
CDY35228 Canola extracellular 41.05 40.07
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 44.56 38.84
CDY02741 Canola extracellular 39.3 38.1
CDY12366 Canola extracellular 36.14 36.27
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078I909UniProt:A0A078I909EnsemblPlants:CDY45623
ProteinID:CDY45623ProteinID:CDY45623.1InterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_ASGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623
GO:GO:0005975GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411
GO:GO:0016043GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0016798GO:GO:0030312
GO:GO:0042546GO:GO:0048046GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00082361001InterPro:IPR000757PFAM:PF00722
PFAM:PF06955PIRSF:PIRSF005604ScanProsite:PS01034PFscan:PS51762PANTHER:PTHR31062PANTHER:PTHR31062:SF48
SUPFAM:SSF49899SignalP:SignalP-noTMUniParc:UPI0004EC8D62InterPro:XET_CInterPro:XTH:
Description
BnaCnng13310DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078I909]
Coordinates
chrLK032630:+:163867..165365
Molecular Weight (calculated)
32732.6 Da
IEP (calculated)
7.520
GRAVY (calculated)
-0.435
Length
285 amino acids
Sequence
(BLAST)
001: MMAKTHFLCI VTLCTLMFIK ISARPTTFAE DFKAAWSGSH IRQVDGGKAI QLVLDQSTGC GFSSKRKYLF GKVSMKIKLI PGDSAGTVTA FYMNSDTDTV
101: RDELDFEFLG NRSGQPYSVQ TNIFAHGKGD REQRVNLWFD PSLDFHTYSI LWSHKHIVFY VDDVPIREYK NNQAKNIAYP TSQPMGVYST LWEADDWATR
201: GGLEKIDWSK APFYAYYKDF DIEGCPVPGP TNCPSNPHNW WEGYAYQSLN AVEARRYRWV RVNHMVYDYC TDKSRYPVPP IECHA
Best Arabidopsis Sequence Match ( AT5G65730.1 )
(BLAST)
001: MAKIYSPSFP GTLCLCIFTL LTLMFIRVSA RPATFVEDFK AAWSESHIRQ MEDGKAIQLV LDQSTGCGFA SKRKYLFGRV SMKIKLIPGD SAGTVTAFYM
101: NSDTATVRDE LDFEFLGNRS GQPYSVQTNI FAHGKGDREQ RVNLWFDPSM DYHTYTILWS HKHIVFYVDD VPIREYKNNE AKNIAYPTSQ PMGVYSTLWE
201: ADDWATRGGL EKIDWSKAPF YAYYKDFDIE GCPVPGPTFC PSNPHNWWEG YAYQSLNAVE ARRYRWVRVN HMVYDYCTDR SRFPVPPPEC RA
Arabidopsis Description
XTH6Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q0WUU2]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.