Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39193 Canola extracellular 84.87 84.56
AT4G30270.1 Thale cress extracellular 83.03 83.64
CDX72228 Canola extracellular 85.98 83.51
CDY66832 Canola extracellular 81.55 81.55
CDY14905 Canola extracellular 80.81 80.81
CDY28174 Canola extracellular 83.03 79.79
CDX68640 Canola extracellular 82.66 79.43
CDY03539 Canola endoplasmic reticulum, extracellular 81.55 70.83
CDY59999 Canola extracellular 60.52 66.4
CDY25903 Canola extracellular 63.47 66.15
CDY67487 Canola extracellular 61.99 64.62
CDX94413 Canola extracellular 66.42 62.72
CDX89393 Canola extracellular 66.05 62.37
VIT_11s0052g01220.t01 Wine grape extracellular 65.31 62.11
KRH37378 Soybean nucleus 60.52 61.65
KRH19136 Soybean nucleus 64.21 61.48
PGSC0003DMT400036329 Potato extracellular 61.99 59.57
VIT_11s0052g01250.t01 Wine grape extracellular 62.73 58.82
Solyc07g009380.2.1 Tomato extracellular, nucleus 59.41 58.55
Solyc05g046290.2.1 Tomato extracellular 61.62 57.99
CDY67778 Canola extracellular 59.04 56.34
CDY25904 Canola extracellular 59.04 56.34
CDY02741 Canola extracellular 59.78 55.1
CDY59998 Canola extracellular 57.2 54.77
CDY61576 Canola vacuole 56.46 54.64
CDY02738 Canola extracellular, nucleus, vacuole 42.8 53.95
CDY27126 Canola extracellular 57.2 53.63
CDY67779 Canola extracellular 56.09 53.15
CDY11863 Canola extracellular 56.09 53.15
CDX88627 Canola extracellular 56.09 53.15
CDY67488 Canola extracellular 55.35 53.0
KRH12375 Soybean extracellular 61.62 52.85
CDY49308 Canola extracellular 60.89 52.55
CDY69806 Canola extracellular 54.98 52.46
CDY50186 Canola extracellular 53.87 51.05
CDX92733 Canola extracellular 53.51 50.7
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 60.52 50.15
CDY12366 Canola extracellular 49.45 47.18
CDX78542 Canola vacuole 51.66 46.98
CDX69621 Canola vacuole 50.55 46.76
CDY09832 Canola vacuole 50.55 46.76
CDX70524 Canola vacuole 51.29 46.64
CDX93096 Canola extracellular 48.71 44.75
CDY69237 Canola extracellular 48.34 44.41
CDY45623 Canola extracellular 45.02 42.81
CDY08756 Canola extracellular 45.02 42.81
CDY06861 Canola extracellular 45.39 42.12
CDY35228 Canola extracellular 45.39 42.12
CDX90896 Canola extracellular 45.02 42.07
CDY53771 Canola extracellular 45.02 42.07
CDY22110 Canola extracellular 45.02 42.07
CDY21985 Canola extracellular 45.02 42.07
CDX72656 Canola extracellular, vacuole 43.91 40.75
CDY31620 Canola extracellular, vacuole 43.54 40.27
CDX71167 Canola vacuole 42.44 38.72
CDX97967 Canola extracellular 42.44 38.46
CDY49788 Canola extracellular 42.44 38.46
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078C5P6EnsemblPlants:CDX72227ProteinID:CDX72227
ProteinID:CDX72227.1InterPro:ConA-like_dom_sfInterPro:GH16GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0005975GO:GO:0006073
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411GO:GO:0016043GO:GO:0016740
GO:GO:0016762GO:GO:0016787GO:GO:0030312GO:GO:0042546GO:GO:0048046GO:GO:0071555
EnsemblPlantsGene:GSBRNA2T00099686001InterPro:IPR000757PFAM:PF00722PFAM:PF06955PIRSF:PIRSF005604PFscan:PS51762
PANTHER:PTHR31062PANTHER:PTHR31062:SF20SUPFAM:SSF49899SignalP:SignalP-noTMUniParc:UPI0004EE487DInterPro:XET_C
InterPro:XTH:::::
Description
BnaC07g42490D
Coordinates
chrLK031796:-:87961..89125
Molecular Weight (calculated)
30844.0 Da
IEP (calculated)
4.564
GRAVY (calculated)
-0.382
Length
271 amino acids
Sequence
(BLAST)
001: MYPFKIFFFT TLLMAVFSFS DADFNSDVDV AWGSDHVKIL NNGQLLTLSL DKLSGSGFQS KQEYLFGQID MQIKLVPGNS AGIVTNFYLK SEGSTWDEIG
101: FEFLGNTSGD PYTLHTNVYT QGKGDKEQQF YLWFDPTANF HTYSILWNPQ RIILTVDDTP IREFKNSESI GVLFPNSQPM RMYANLWNAD DWATRGGRVK
201: TDWSGAPFTA SFRNINIDGT NKPSSSWYTQ QMDATSQARL EWVQKNYMIY TYCTDTEKFP QGVPSECATS V
Best Arabidopsis Sequence Match ( AT4G25810.1 )
(BLAST)
001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
Arabidopsis Description
XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.