Factsheet for Solyc05g046290.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036329	Potato	extracellular	93.06	95.04
KRH19136	Soybean	nucleus	72.92	74.2
KRH37378	Soybean	nucleus	67.01	72.56
Solyc07g009380.2.1	Tomato	extracellular, nucleus	68.4	71.64
Solyc03g093080.2.1	Tomato	extracellular	68.06	68.53
Solyc03g093130.2.1	Tomato	extracellular	67.71	67.94
Solyc03g093120.2.1	Tomato	extracellular	67.36	67.83
VIT_11s0052g01250.t01	Wine grape	extracellular	67.71	67.47
Solyc03g093110.2.1	Tomato	extracellular	67.01	67.25
Solyc12g098610.1.1	Tomato	nucleus	60.42	66.67
Solyc07g006860.2.1	Tomato	extracellular	65.97	66.67
Bra008806.1-P	Field mustard	extracellular	66.32	66.55
Bra013922.1-P	Field mustard	extracellular	66.32	66.55
CDX89393	Canola	extracellular	66.32	66.55
AT4G25810.1	Thale cress	extracellular	65.97	66.43
CDX94413	Canola	extracellular	65.97	66.2
Bra002719.1-P	Field mustard	extracellular	64.93	66.08
CDY59999	Canola	extracellular	55.9	65.18
CDY25903	Canola	extracellular	58.33	64.62
CDY67487	Canola	extracellular	58.33	64.62
CDY39193	Canola	extracellular	60.76	64.34
AT4G30270.1	Thale cress	extracellular	60.07	64.31
Bra024089.1-P	Field mustard	extracellular	61.81	63.8
Solyc09g092520.2.1	Tomato	nucleus	61.11	63.77
Solyc07g006870.2.1	Tomato	extracellular, vacuole	62.15	63.48
CDY66832	Canola	extracellular	59.72	63.47
CDY14905	Canola	extracellular	59.72	63.47
Bra020433.1-P	Field mustard	extracellular	57.29	63.46
AT5G57560.1	Thale cress	extracellular	62.15	63.03
Bra011179.1-P	Field mustard	extracellular	61.46	62.77
CDY28174	Canola	extracellular	61.46	62.77
CDX72228	Canola	extracellular	60.76	62.72
CDX68640	Canola	extracellular	61.11	62.41
KRH12375	Soybean	extracellular	68.06	62.03
CDX72227	Canola	extracellular	57.99	61.62
Solyc07g056000.2.1	Tomato	extracellular, nucleus	57.99	58.19
Solyc12g017240.1.1	Tomato	extracellular	56.25	56.06
CDY02741	Canola	extracellular	56.94	55.78
CDY03539	Canola	endoplasmic reticulum, extracellular	60.42	55.77
Solyc07g055990.2.1	Tomato	nucleus	54.17	53.79
Solyc12g011030.1.1	Tomato	nucleus	50.35	52.35
Solyc12g007270.1.1	Tomato	extracellular	51.74	50.85
Solyc07g006850.1.1	Tomato	golgi	58.68	49.42
Solyc12g007260.1.1	Tomato	extracellular	50.0	49.32
Solyc12g007250.1.1	Tomato	extracellular	49.65	49.14
Solyc11g065600.1.1	Tomato	nucleus	48.26	47.44
Solyc03g098430.2.1	Tomato	extracellular	46.18	47.0
Solyc11g040140.1.1	Tomato	extracellular	48.61	46.67
Solyc02g091920.2.1	Tomato	nucleus	46.88	45.76
Solyc01g099630.2.1	Tomato	extracellular	45.83	44.59
Solyc02g080160.2.1	Tomato	extracellular	45.49	43.96
Solyc10g005350.2.1	Tomato	extracellular	43.75	43.75
Solyc03g031800.2.1	Tomato	extracellular	44.44	43.39
Solyc07g052980.2.1	Tomato	extracellular	44.1	42.91
Solyc01g106650.2.1	Tomato	extracellular, vacuole	42.36	41.64

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	UniProt:K4C0W2
PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF101	SUPFAM:SSF49899	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc05g046290.2	EnsemblPlants:Solyc05g046290.2.1
TMHMM:TMhelix	UniParc:UPI0002766AC6	InterPro:XET_C	InterPro:XTH	SEG:seg	:

Description

Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:K4C0W2]

Coordinates

chr5:+:58485924..58488638

Molecular Weight (calculated)

32918.7 Da

IEP (calculated)

6.264

GRAVY (calculated)

-0.319

Length

288 amino acids

Sequence
(BLAST)

001: MQFKNTYTMK TTFLLFLILS FFFSALAGNF NQDFDITWGD DRAKILENGQ LMTLSLDKVS GSGFRSKNQY LFGKIDLKIK LVPGNSAGTV TTYYLSSIGS
101: SHDEIDFEFL GNLSGDPYIL HTNVFTQGKG DREQQFYLWF DPTKDFHTYS ILWNPQSIIF SVDGTPIRQF KNLESSGIPY PKSQPMWIYS SLWNADDWAT
201: RGGLVKIDWT KAPFIASYTN FNAQACVWSS TSTSSSCNST TQDSWLSENL DITGKSRIKW VQNNYMIYNY CNDIKRFPQG FPLECSLN

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.