Factsheet for Solyc01g106650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013128	Potato	extracellular	50.85	93.12
VIT_03s0088g00650.t01	Wine grape	extracellular, vacuole	66.89	66.44
KRG91154	Soybean	extracellular	66.21	65.54
KRH35625	Soybean	vacuole	65.53	64.86
GSMUA_Achr1P14290_001	Banana	vacuole	64.51	63.85
Bra040716.1-P	Field mustard	vacuole	64.16	63.3
CDX71167	Canola	vacuole	63.48	62.63
AT2G14620.1	Thale cress	vacuole	63.82	62.54
Solyc02g091920.2.1	Tomato	nucleus	44.71	44.41
Solyc03g098430.2.1	Tomato	extracellular	42.66	44.17
Solyc11g065600.1.1	Tomato	nucleus	43.69	43.69
Solyc11g040140.1.1	Tomato	extracellular	44.71	43.67
Solyc07g009380.2.1	Tomato	extracellular, nucleus	40.96	43.64
Solyc12g098610.1.1	Tomato	nucleus	38.57	43.3
Solyc09g092520.2.1	Tomato	nucleus	39.93	42.39
Solyc05g046290.2.1	Tomato	extracellular	41.64	42.36
Solyc03g093120.2.1	Tomato	extracellular	41.3	42.31
Solyc03g093080.2.1	Tomato	extracellular	41.3	42.31
Solyc03g093130.2.1	Tomato	extracellular	41.3	42.16
Solyc07g056000.2.1	Tomato	extracellular, nucleus	41.3	42.16
Solyc07g006860.2.1	Tomato	extracellular	40.96	42.11
Solyc07g006870.2.1	Tomato	extracellular, vacuole	40.27	41.84
Solyc03g093110.2.1	Tomato	extracellular	40.61	41.46
Solyc10g005350.2.1	Tomato	extracellular	40.61	41.32
Solyc12g017240.1.1	Tomato	extracellular	40.61	41.18
Solyc01g099630.2.1	Tomato	extracellular	40.96	40.54
Solyc07g055990.2.1	Tomato	nucleus	39.93	40.34
Solyc07g052980.2.1	Tomato	extracellular	40.61	40.2
Solyc12g007260.1.1	Tomato	extracellular	39.93	40.07
Solyc12g007250.1.1	Tomato	extracellular	39.59	39.86
Solyc03g031800.2.1	Tomato	extracellular	39.93	39.66
Solyc02g080160.2.1	Tomato	extracellular	39.93	39.26
Solyc12g007270.1.1	Tomato	extracellular	37.2	37.2
Solyc12g011030.1.1	Tomato	nucleus	35.15	37.18
Solyc07g006850.1.1	Tomato	golgi	41.64	35.67

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	UniProt:K4B2N2	PFAM:PF00722	PFAM:PF06955
PIRSF:PIRSF005604	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF37	SUPFAM:SSF49899	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc01g106650.2	EnsemblPlants:Solyc01g106650.2.1	TMHMM:TMhelix	UniParc:UPI00027678D0	InterPro:XET_C	InterPro:XTH

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 10 [Source:Projected from Arabidopsis thaliana (AT2G14620) UniProtKB/Swiss-Prot;Acc:Q9ZVK1]

Coordinates

chr1:-:94434107..94435528

Molecular Weight (calculated)

34586.8 Da

IEP (calculated)

8.270

GRAVY (calculated)

-0.543

Length

293 amino acids

Sequence
(BLAST)

001: MNYFSRFIFL ATYFIYLSHI ALASIVSTGD YNKDFYVTYS PNHINTSADG RTRSLIFDKE SGTEIASKDM YLFGQFDMKI KLIPGNSAGT VVAFYLASGQ
101: PNRDEIDFEF LGNVDGKRYT LQTNVYVDGF DDREQRINLW FDPTQDYHTY SILWNLHQIV FMVDWVPIRT YRNHADKGAK YPHWQPMELK MSLWNGEDWA
201: TDGGKTKIDW SKSPFVATLG SYKIDACVWK GNARFCRVEN ENHWWNKGQS STLTWTQRRL FKWVRKYHLT YDYCMDNKRF QNNMPIECSL PKY

Best Arabidopsis Sequence Match ( AT2G14620.1 )
(BLAST)

001: MTLINRSKPF VLLVGFSIIS SLLLWVSQAS VVSSGDFNKD FFVTWSPTHV NTSNDGRSRT LKLDQESGAS FSSIQTFLFG QIDMKIKLIR GSSQGTVVAY
101: YMSSDQPNRD EIDFEFLGNV NGQPYILQTN VYAEGLDNRE ERIHLWFDPA KDFHTYSILW NIHQIVFMVD QIPIRLYRNH GEKGVAYPRL QPMSVQASLW
201: NGESWATRGG HDKIDWSKGP FVASFGDYKI DACIWIGNTS FCNGESTENW WNKNEFSSLT RVQKRWFKWV RKYHLIYDYC QDYGRFNNKL PKECSLPKY

Arabidopsis Description

XTH10Probable xyloglucan endotransglucosylase/hydrolase protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVK1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.