Factsheet for Solyc10g005350.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g031800.2.1	Tomato	extracellular	85.42	83.39
KRG91233	Soybean	extracellular	76.74	73.42
KRH35587	Soybean	extracellular	76.74	73.18
VIT_10s0116g00520.t01	Wine grape	extracellular, vacuole	75.35	72.33
Solyc02g080160.2.1	Tomato	extracellular	72.92	70.47
Bra019846.1-P	Field mustard	extracellular	71.88	69.23
CDX97967	Canola	extracellular	71.88	69.23
CDY49788	Canola	extracellular	71.53	68.9
AT1G11545.1	Thale cress	extracellular	71.88	67.87
GSMUA_Achr1P08500_001	Banana	extracellular	62.85	66.79
TraesCS2D01G224300.1	Wheat	extracellular	63.89	60.53
TraesCS2B01G244500.1	Wheat	extracellular	63.54	59.8
KXG36371	Sorghum	extracellular	63.89	57.68
Zm00001d021667_P001	Maize	plasma membrane	64.24	56.06
HORVU2Hr1G045330.4	Barley	extracellular, vacuole	63.54	49.33
Solyc02g091920.2.1	Tomato	nucleus	45.83	44.75
Solyc12g098610.1.1	Tomato	nucleus	39.93	44.06
Solyc03g098430.2.1	Tomato	extracellular	43.06	43.82
Solyc05g046290.2.1	Tomato	extracellular	43.75	43.75
Solyc11g065600.1.1	Tomato	nucleus	44.44	43.69
Solyc07g009380.2.1	Tomato	extracellular, nucleus	41.67	43.64
Solyc07g006870.2.1	Tomato	extracellular, vacuole	42.71	43.62
Solyc07g052980.2.1	Tomato	extracellular	44.44	43.24
Solyc03g093120.2.1	Tomato	extracellular	42.71	43.01
Solyc11g040140.1.1	Tomato	extracellular	44.79	43.0
Solyc01g099630.2.1	Tomato	extracellular	44.1	42.91
Solyc03g093130.2.1	Tomato	extracellular	42.36	42.51
Solyc07g006860.2.1	Tomato	extracellular	42.01	42.46
Solyc03g093080.2.1	Tomato	extracellular	42.01	42.31
Solyc03g093110.2.1	Tomato	extracellular	42.01	42.16
Solyc09g092520.2.1	Tomato	nucleus	40.28	42.03
Solyc01g106650.2.1	Tomato	extracellular, vacuole	41.32	40.61
Solyc07g055990.2.1	Tomato	nucleus	40.62	40.34
Solyc12g017240.1.1	Tomato	extracellular	40.28	40.14
Solyc07g056000.2.1	Tomato	extracellular, nucleus	39.93	40.07
Solyc12g007270.1.1	Tomato	extracellular	40.28	39.59
Solyc12g007250.1.1	Tomato	extracellular	39.58	39.18
Solyc12g007260.1.1	Tomato	extracellular	39.24	38.7
Solyc12g011030.1.1	Tomato	nucleus	34.72	36.1
Solyc07g006850.1.1	Tomato	golgi	40.97	34.5

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	UniProt:K4CX68
PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF1	SUPFAM:SSF49899	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc10g005350.2	EnsemblPlants:Solyc10g005350.2.1
UniParc:UPI000276C75A	InterPro:XET_C	InterPro:XTH	:	:	:

Description

Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:K4CX68]

Coordinates

chr10:+:258489..260485

Molecular Weight (calculated)

33754.3 Da

IEP (calculated)

4.628

GRAVY (calculated)

-0.515

Length

288 amino acids

Sequence
(BLAST)

001: MANLLLIGVV IAMLCSEIKC SFEDNFSKSD CPDSHFKTSE DGQIWYLSLD NKAGCGFMTR QRYRFGWFSM KLKLVGGDSA GVVTAYYMCT EDGAGPTRDE
101: LDFEFLGNRT GEPYLIQTNV YKNGTGGREM RHVLWFDPTQ DFHTYSILWN SHQIVFFVDK VPIRVYRNAN YTNNFFPNEK PMYLFSSIWN ADDWATRGGL
201: EKTDWKNAPF VSTYMDFNVD ACQWEDPFPS CVSTTTQNWW DQYNSWHLSS DQKLDYAWVQ RNLVTYDYCQ DIERYKVKPE ECWVSPWD

Best Arabidopsis Sequence Match ( AT1G11545.1 )
(BLAST)

001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA

Arabidopsis Description

XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.