Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49788 | Canola | extracellular | 91.8 | 93.65 |
| CDX97967 | Canola | extracellular | 90.49 | 92.31 |
| Bra019846.1-P | Field mustard | extracellular | 90.49 | 92.31 |
| KRG91233 | Soybean | extracellular | 77.05 | 78.07 |
| KRH35587 | Soybean | extracellular | 76.72 | 77.48 |
| VIT_10s0116g00520.t01 | Wine grape | extracellular, vacuole | 73.11 | 74.33 |
| PGSC0003DMT400061841 | Potato | extracellular | 70.49 | 72.88 |
| Solyc03g031800.2.1 | Tomato | extracellular | 69.84 | 72.2 |
| Solyc10g005350.2.1 | Tomato | extracellular | 67.87 | 71.88 |
| GSMUA_Achr1P08500_001 | Banana | extracellular | 60.33 | 67.9 |
| PGSC0003DMT400005342 | Potato | extracellular | 61.97 | 63.42 |
| Solyc02g080160.2.1 | Tomato | extracellular | 61.64 | 63.09 |
| TraesCS2D01G224300.1 | Wheat | extracellular | 62.62 | 62.83 |
| TraesCS2B01G244500.1 | Wheat | extracellular | 62.62 | 62.42 |
| KXG36371 | Sorghum | extracellular | 60.0 | 57.37 |
| Zm00001d021667_P001 | Maize | plasma membrane | 61.97 | 57.27 |
| HORVU2Hr1G045330.4 | Barley | extracellular, vacuole | 61.64 | 50.67 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 47.87 | 49.83 |
| AT2G06850.1 | Thale cress | extracellular | 47.54 | 48.99 |
| AT5G65730.1 | Thale cress | extracellular | 45.25 | 47.26 |
| AT4G37800.1 | Thale cress | extracellular, vacuole | 44.59 | 46.42 |
| AT5G57550.1 | Thale cress | extracellular | 42.3 | 45.42 |
| AT4G03210.1 | Thale cress | extracellular | 42.95 | 45.17 |
| AT5G57560.1 | Thale cress | extracellular | 41.97 | 45.07 |
| AT5G57540.1 | Thale cress | extracellular | 41.97 | 45.07 |
| AT5G57530.1 | Thale cress | extracellular | 41.97 | 44.91 |
| AT4G25810.1 | Thale cress | extracellular | 41.97 | 44.76 |
| AT3G23730.1 | Thale cress | extracellular, vacuole | 42.3 | 44.33 |
| AT4G30270.1 | Thale cress | extracellular | 39.02 | 44.24 |
| AT4G25820.1 | Thale cress | extracellular | 40.66 | 43.21 |
| AT2G14620.1 | Thale cress | vacuole | 41.64 | 42.47 |
| AT4G14130.1 | Thale cress | extracellular | 40.0 | 42.21 |
| AT2G18800.1 | Thale cress | extracellular | 39.67 | 39.67 |
| AT4G28850.1 | Thale cress | extracellular | 37.7 | 39.38 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:837698 | UniProt:A0A178W0W2 | ProteinID:AAF16642.1 | ProteinID:AEE28750.1 |
| EMBL:AK228427 | ArrayExpress:AT1G11545 | EnsemblPlantsGene:AT1G11545 | RefSeq:AT1G11545 | TAIR:AT1G11545 | RefSeq:AT1G11545-TAIR-G |
| EnsemblPlants:AT1G11545.1 | TAIR:AT1G11545.1 | EMBL:AY088546 | Unigene:At.47525 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf |
| InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 |
| InterPro:IPR000757 | RefSeq:NP_563892.1 | ProteinID:OAP11898.1 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00737 |
| ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF1 | UniProt:Q8L9A9 | SUPFAM:SSF49899 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000162D24 | InterPro:XET_C | InterPro:XTH | Symbol:XTH8 |
Description
XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
Coordinates
chr1:-:3878495..3880391
Molecular Weight (calculated)
35566.5 Da
IEP (calculated)
5.030
GRAVY (calculated)
-0.538
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.