Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06861 | Canola | extracellular | 84.93 | 84.93 |
| CDY35228 | Canola | extracellular | 84.59 | 84.59 |
| Bra011066.1-P | Field mustard | extracellular | 84.59 | 84.59 |
| KRH39331 | Soybean | nucleus | 61.64 | 62.28 |
| VIT_11s0016g03480.t01 | Wine grape | extracellular | 61.99 | 62.2 |
| KRH76320 | Soybean | nucleus | 60.96 | 61.59 |
| KRH41530 | Soybean | nucleus | 59.25 | 61.13 |
| GSMUA_Achr7P10940_001 | Banana | extracellular | 56.51 | 59.35 |
| Solyc12g007260.1.1 | Tomato | extracellular | 59.25 | 59.25 |
| Solyc12g007250.1.1 | Tomato | extracellular | 58.9 | 59.11 |
| GSMUA_Achr3P03390_001 | Banana | extracellular | 54.79 | 54.42 |
| GSMUA_Achr8P19740_001 | Banana | extracellular | 47.6 | 51.67 |
| OQU75596 | Sorghum | cytosol, extracellular, plastid | 27.4 | 49.38 |
| TraesCS7B01G242900.1 | Wheat | extracellular, vacuole | 48.29 | 48.79 |
| TraesCS7A01G331200.1 | Wheat | vacuole | 47.6 | 48.77 |
| EER89799 | Sorghum | vacuole | 48.97 | 48.64 |
| TraesCS7D01G339400.1 | Wheat | extracellular | 47.95 | 48.44 |
| AT4G30270.1 | Thale cress | extracellular | 44.52 | 48.33 |
| AT5G57530.1 | Thale cress | extracellular | 46.92 | 48.07 |
| AT5G57540.1 | Thale cress | extracellular | 46.58 | 47.89 |
| Zm00001d046007_P001 | Maize | extracellular | 47.95 | 47.46 |
| AT4G25820.1 | Thale cress | extracellular | 46.58 | 47.39 |
| AT4G25810.1 | Thale cress | extracellular | 46.23 | 47.2 |
| AT5G57550.1 | Thale cress | extracellular | 45.89 | 47.18 |
| TraesCS2B01G526500.1 | Wheat | vacuole | 46.23 | 46.71 |
| AT5G57560.1 | Thale cress | extracellular | 45.21 | 46.48 |
| AT3G23730.1 | Thale cress | extracellular, vacuole | 46.23 | 46.39 |
| TraesCS2A01G498200.1 | Wheat | extracellular | 45.89 | 46.37 |
| AT4G14130.1 | Thale cress | extracellular | 45.89 | 46.37 |
| TraesCS2D01G498600.1 | Wheat | extracellular, vacuole | 45.89 | 46.37 |
| TraesCS2D01G498700.1 | Wheat | extracellular, vacuole | 45.89 | 46.37 |
| TraesCS2B01G104700.1 | Wheat | extracellular | 45.21 | 46.32 |
| TraesCS2D01G498400.1 | Wheat | extracellular | 45.55 | 46.02 |
| TraesCS2D01G498500.2 | Wheat | vacuole | 45.55 | 46.02 |
| TraesCS2D01G498800.1 | Wheat | vacuole | 45.55 | 46.02 |
| TraesCS2A01G498300.1 | Wheat | vacuole | 45.55 | 46.02 |
| TraesCS2A01G498400.1 | Wheat | vacuole | 45.55 | 46.02 |
| TraesCS2A01G089000.1 | Wheat | extracellular | 44.52 | 45.77 |
| TraesCS2D01G086800.1 | Wheat | extracellular | 44.18 | 45.58 |
| AT2G18800.1 | Thale cress | extracellular | 47.6 | 45.57 |
| Zm00001d053320_P001 | Maize | vacuole | 45.21 | 45.36 |
| TraesCS2B01G526600.1 | Wheat | extracellular | 45.21 | 45.21 |
| EES04929 | Sorghum | extracellular, vacuole | 44.52 | 44.83 |
| TraesCS2A01G498500.1 | Wheat | vacuole | 44.52 | 44.52 |
| HORVU2Hr1G111060.1 | Barley | vacuole | 38.36 | 44.44 |
| EES04926 | Sorghum | extracellular, vacuole | 44.52 | 44.07 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 43.84 | 43.69 |
| HORVU7Hr1G081740.1 | Barley | extracellular, vacuole | 47.95 | 43.08 |
| HORVU2Hr1G014530.3 | Barley | extracellular | 45.89 | 42.95 |
| Zm00001d015977_P001 | Maize | mitochondrion | 44.18 | 42.86 |
| AT4G03210.1 | Thale cress | extracellular | 41.78 | 42.07 |
| AT2G14620.1 | Thale cress | vacuole | 42.47 | 41.47 |
| AT5G65730.1 | Thale cress | extracellular | 40.75 | 40.75 |
| AT2G06850.1 | Thale cress | extracellular | 41.1 | 40.54 |
| AT4G37800.1 | Thale cress | extracellular, vacuole | 40.41 | 40.27 |
| AT1G11545.1 | Thale cress | extracellular | 39.38 | 37.7 |
| HORVU2Hr1G111030.2 | Barley | vacuole | 41.44 | 36.78 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:829006 | UniProt:A0A178URX5 | ProteinID:AEE85554.1 | EMBL:AK230242 |
| ArrayExpress:AT4G28850 | EnsemblPlantsGene:AT4G28850 | RefSeq:AT4G28850 | TAIR:AT4G28850 | RefSeq:AT4G28850-TAIR-G | EnsemblPlants:AT4G28850.1 |
| TAIR:AT4G28850.1 | ProteinID:CAA22967.1 | ProteinID:CAB81473.1 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | RefSeq:NP_194614.1 |
| ProteinID:OAO96689.1 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | PO:PO:0000256 | PO:PO:0000262 |
| PO:PO:0009005 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF55 | UniProt:Q9SVV2 |
| SUPFAM:SSF49899 | SignalP:SignalP-noTM | UniParc:UPI0000048A0C | InterPro:XET_C | InterPro:XTH | Symbol:XTH26 |
Description
XTH26Probable xyloglucan endotransglucosylase/hydrolase protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVV2]
Coordinates
chr4:+:14244290..14246037
Molecular Weight (calculated)
32925.3 Da
IEP (calculated)
9.906
GRAVY (calculated)
-0.311
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLQAKTLM FVLAAALATL GRTFVEADFS KNFIVTWGKD HMFMNGTNLR LVLDKSAGSA IKSKVAHLFG SVEMLIKLVP GNSAGTVAAY YLSSTGSTHD
101: EIDFEFLGNA TGQPYTIHTN LYAQGKGNRE QQFRPWFNPT NGFHNYTIHW NPSEVVWFVD GTPIRVFRNY ESEGIAYPNK QGMKVFASLW NAEDWATQGG
201: RVKTNWTLAP FVAEGRRYKA RACLWKGSVS IKQCVDPTIR SNWWTSPSFS QLTASQLTKM QKIRDGFMIY DYCKDTNRFK GVMPPECSKK QF
101: EIDFEFLGNA TGQPYTIHTN LYAQGKGNRE QQFRPWFNPT NGFHNYTIHW NPSEVVWFVD GTPIRVFRNY ESEGIAYPNK QGMKVFASLW NAEDWATQGG
201: RVKTNWTLAP FVAEGRRYKA RACLWKGSVS IKQCVDPTIR SNWWTSPSFS QLTASQLTKM QKIRDGFMIY DYCKDTNRFK GVMPPECSKK QF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.