Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 5
- mitochondrion 1
- vacuole 4
- plasma membrane 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72656 | Canola | extracellular, vacuole | 93.86 | 94.18 |
| Bra017855.1-P | Field mustard | extracellular, vacuole | 93.86 | 94.18 |
| CDY31620 | Canola | extracellular, vacuole | 93.86 | 93.86 |
| GSMUA_Achr8P26470_001 | Banana | extracellular | 75.09 | 76.92 |
| GSMUA_Achr3P26220_001 | Banana | extracellular | 73.72 | 75.52 |
| GSMUA_Achr8P05120_001 | Banana | extracellular | 73.04 | 74.83 |
| PGSC0003DMT400055138 | Potato | extracellular | 74.06 | 73.56 |
| Solyc02g091920.2.1 | Tomato | nucleus | 73.38 | 72.88 |
| KRH77174 | Soybean | extracellular | 73.38 | 72.64 |
| KRH04364 | Soybean | extracellular | 72.35 | 72.6 |
| AT5G65730.1 | Thale cress | extracellular | 72.35 | 72.6 |
| KRH58172 | Soybean | extracellular, vacuole | 72.01 | 72.51 |
| KRH28311 | Soybean | extracellular, vacuole | 72.7 | 71.72 |
| GSMUA_Achr1P10380_001 | Banana | extracellular, vacuole | 65.53 | 65.08 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 47.78 | 47.78 |
| AT4G03210.1 | Thale cress | extracellular | 46.42 | 46.9 |
| AT4G25810.1 | Thale cress | extracellular | 45.39 | 46.5 |
| AT4G14130.1 | Thale cress | extracellular | 45.39 | 46.02 |
| AT2G06850.1 | Thale cress | extracellular | 46.42 | 45.95 |
| AT5G57540.1 | Thale cress | extracellular | 44.37 | 45.77 |
| AT4G30270.1 | Thale cress | extracellular | 41.98 | 45.72 |
| AT4G25820.1 | Thale cress | extracellular | 44.71 | 45.64 |
| AT5G57530.1 | Thale cress | extracellular | 44.37 | 45.61 |
| AT5G57560.1 | Thale cress | extracellular | 44.03 | 45.42 |
| AT5G57550.1 | Thale cress | extracellular | 44.03 | 45.42 |
| AT3G23730.1 | Thale cress | extracellular, vacuole | 44.71 | 45.02 |
| AT2G14620.1 | Thale cress | vacuole | 45.73 | 44.82 |
| AT1G11545.1 | Thale cress | extracellular | 46.42 | 44.59 |
| AT2G18800.1 | Thale cress | extracellular | 45.39 | 43.61 |
| AT4G28850.1 | Thale cress | extracellular | 40.27 | 40.41 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:829936 | UniProt:A0A178V2Q3 | ProteinID:AEE86839.1 | ArrayExpress:AT4G37800 |
| EnsemblPlantsGene:AT4G37800 | RefSeq:AT4G37800 | TAIR:AT4G37800 | RefSeq:AT4G37800-TAIR-G | EnsemblPlants:AT4G37800.1 | TAIR:AT4G37800.1 |
| EMBL:AY085282 | EMBL:AY093025 | EMBL:AY128926 | ProteinID:CAB38928.1 | ProteinID:CAB80445.1 | InterPro:ConA-like_dom_sf |
| InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 |
| InterPro:IPR000757 | RefSeq:NP_195494.1 | ProteinID:OAO99332.1 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01034 | PFscan:PS51762 |
| PANTHER:PTHR31062 | PANTHER:PTHR31062:SF48 | UniProt:Q8LER3 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | UniParc:UPI0000048A8A |
| InterPro:XET_C | InterPro:XTH | Symbol:XTH7 | : | : | : |
Description
XTH7Probable xyloglucan endotransglucosylase/hydrolase protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LER3]
Coordinates
chr4:-:17775370..17777445
Molecular Weight (calculated)
33682.6 Da
IEP (calculated)
7.456
GRAVY (calculated)
-0.437
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVSLFSSRN VFYTLSLCLF AALYQPVMSR PAKFEDDFRI AWSDTHITQI DGGRAIQLKL DPSSGCGFAS KKQYLFGRVS MKIKLIPGDS AGTVTAFYMN
101: SDTDSVRDEL DFEFLGNRSG QPYTVQTNVF AHGKGDREQR VNLWFDPSRD FHEYAISWNH LRIVFYVDNV PIRVYKNNEA RKVPYPRFQP MGVYSTLWEA
201: DDWATRGGIE KINWSRAPFY AYYKDFDIEG CPVPGPADCP ANSKNWWEGS AYHQLSPVEA RSYRWVRVNH MVYDYCTDKS RFPVPPPECS AGI
101: SDTDSVRDEL DFEFLGNRSG QPYTVQTNVF AHGKGDREQR VNLWFDPSRD FHEYAISWNH LRIVFYVDNV PIRVYKNNEA RKVPYPRFQP MGVYSTLWEA
201: DDWATRGGIE KINWSRAPFY AYYKDFDIEG CPVPGPADCP ANSKNWWEGS AYHQLSPVEA RSYRWVRVNH MVYDYCTDKS RFPVPPPECS AGI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.