CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04364	Soybean	extracellular	96.22	95.89
KRH28311	Soybean	extracellular, vacuole	84.54	82.83
KRH77174	Soybean	extracellular	83.16	81.76
GSMUA_Achr3P26220_001	Banana	extracellular	75.26	76.57
GSMUA_Achr8P05120_001	Banana	extracellular	74.91	76.22
PGSC0003DMT400055138	Potato	extracellular	76.98	75.93
GSMUA_Achr8P26470_001	Banana	extracellular	74.57	75.87
Solyc02g091920.2.1	Tomato	nucleus	76.63	75.59
Bra024415.1-P	Field mustard	extracellular	72.16	73.68
CDY08756	Canola	extracellular	72.16	73.68
CDY45623	Canola	extracellular	72.16	73.68
AT5G65730.1	Thale cress	extracellular	72.85	72.6
CDX72656	Canola	extracellular, vacuole	72.85	72.6
Bra017855.1-P	Field mustard	extracellular, vacuole	72.51	72.26
AT4G37800.1	Thale cress	extracellular, vacuole	72.51	72.01
CDY31620	Canola	extracellular, vacuole	72.51	72.01
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	68.38	67.46
KRH22496	Soybean	extracellular	50.86	51.03
KRH37378	Soybean	nucleus	46.05	50.38
KRH19005	Soybean	vacuole	48.8	49.82
KRH06776	Soybean	endoplasmic reticulum	50.17	49.49
KRH19003	Soybean	extracellular	48.8	49.48
KRH02890	Soybean	extracellular	48.45	49.47
KRH02893	Soybean	extracellular	48.45	49.47
KRH26853	Soybean	vacuole	50.17	49.32
KRH19136	Soybean	nucleus	47.77	49.12
KRH41530	Soybean	nucleus	47.77	49.12
KRH25426	Soybean	extracellular	50.17	48.99
KRH02892	Soybean	extracellular	48.11	48.78
KRH19002	Soybean	extracellular	47.77	48.77
KRH19006	Soybean	vacuole	48.8	48.46
KRH56088	Soybean	vacuole	49.14	48.15
KRH31558	Soybean	nucleus	45.36	47.83
KRG94750	Soybean	endoplasmic reticulum	48.45	47.8
KRH02889	Soybean	extracellular	47.77	47.77
KRG97361	Soybean	nucleus	45.36	47.31
KRH02894	Soybean	endoplasmic reticulum, extracellular	47.42	47.26
KRH76320	Soybean	nucleus	46.74	47.06
KRH35625	Soybean	vacuole	47.77	46.96
KRH02895	Soybean	cytosol	47.08	46.76
KRH39331	Soybean	nucleus	46.39	46.71
KRH58823	Soybean	extracellular, nucleus	45.02	46.29
KRG91154	Soybean	extracellular	47.08	46.28
KRH70105	Soybean	nucleus	49.14	46.28
KRH42721	Soybean	extracellular, nucleus	44.67	45.94
KRH42944	Soybean	extracellular	45.7	45.24
KRH59064	Soybean	extracellular	45.7	44.93
KRG91233	Soybean	extracellular	46.05	44.52
KRH35587	Soybean	extracellular	45.7	44.04
KRG94748	Soybean	extracellular, vacuole	39.18	44.02
KRG98913	Soybean	vacuole	43.3	43.75
KRH73676	Soybean	extracellular	42.27	43.46
KRH14468	Soybean	extracellular	42.61	43.06
KRH12375	Soybean	extracellular	46.74	43.04
KRH06775	Soybean	endoplasmic reticulum	48.8	41.16

Protein Annotations

EntrezGene:100785470	Gene3D:2.60.120.200	MapMan:50.2.4	EMBL:ACUP02003217	ncoils:Coil	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	EnsemblPlantsGene:GLYMA_05G109600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	UniProt:I1K2H6	InterPro:IPR000757	EnsemblPlants:KRH58172	ProteinID:KRH58172	ProteinID:KRH58172.1
PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062
PANTHER:PTHR31062:SF48	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233A566	InterPro:XET_C
InterPro:XTH	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:29118132..29120389

Molecular Weight (calculated)

33366.4 Da

IEP (calculated)

8.111

GRAVY (calculated)

-0.328

Length

291 amino acids

Sequence
(BLAST)

001: MAMSYQIRNS GVFFFLCVLL FGVSALGRPA TFLQDFHVTW SDSHIKQLDQ GRAIQLRLDQ SSGCGFASKV KYMFGRVSMK IKLVPGDSAG TVTAFYLNSD
101: TNYVRDELDF EFLGNRTGQP YTVQTNIYAH GKGDREQRVN LWFDPAADFH TYSILWNHHH IVFYVDDFPI RVYKNNEARG IPYPKMQAMG VYSTLWEADN
201: WATRGGLEKI DWSKAPFYAY YKDFNIEGCA VPGPANCASN PSNWWEGAAY QALNSIEARR YRWVRLNHVI YDYCKDKSRF PVTPPECLAG I

Best Arabidopsis Sequence Match ( AT5G65730.1 )
(BLAST)

001: MAKIYSPSFP GTLCLCIFTL LTLMFIRVSA RPATFVEDFK AAWSESHIRQ MEDGKAIQLV LDQSTGCGFA SKRKYLFGRV SMKIKLIPGD SAGTVTAFYM
101: NSDTATVRDE LDFEFLGNRS GQPYSVQTNI FAHGKGDREQ RVNLWFDPSM DYHTYTILWS HKHIVFYVDD VPIREYKNNE AKNIAYPTSQ PMGVYSTLWE
201: ADDWATRGGL EKIDWSKAPF YAYYKDFDIE GCPVPGPTFC PSNPHNWWEG YAYQSLNAVE ARRYRWVRVN HMVYDYCTDR SRFPVPPPEC RA

Arabidopsis Description

XTH6Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q0WUU2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.