Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19005 | Soybean | vacuole | 81.85 | 83.86 |
| KRH02890 | Soybean | extracellular | 81.51 | 83.51 |
| KRH02893 | Soybean | extracellular | 81.51 | 83.51 |
| KRH02892 | Soybean | extracellular | 79.11 | 80.49 |
| KRH19002 | Soybean | extracellular | 78.08 | 80.0 |
| KRH19003 | Soybean | extracellular | 78.42 | 79.79 |
| KRH19136 | Soybean | nucleus | 77.05 | 79.51 |
| KRH02895 | Soybean | cytosol | 76.71 | 76.45 |
| Solyc03g093080.2.1 | Tomato | extracellular | 73.97 | 75.52 |
| PGSC0003DMT400038413 | Potato | extracellular | 73.63 | 75.17 |
| Solyc03g093120.2.1 | Tomato | extracellular | 73.29 | 74.83 |
| KRH37378 | Soybean | nucleus | 68.15 | 74.81 |
| Solyc03g093130.2.1 | Tomato | extracellular | 72.95 | 74.22 |
| Solyc03g093110.2.1 | Tomato | extracellular | 72.26 | 73.52 |
| KRH02889 | Soybean | extracellular | 70.89 | 71.13 |
| KRH19006 | Soybean | vacuole | 70.89 | 70.65 |
| KRH31558 | Soybean | nucleus | 66.44 | 70.29 |
| KRG97361 | Soybean | nucleus | 66.44 | 69.53 |
| KRH58823 | Soybean | extracellular, nucleus | 65.75 | 67.84 |
| KRH42721 | Soybean | extracellular, nucleus | 65.41 | 67.49 |
| KRH12375 | Soybean | extracellular | 68.15 | 62.97 |
| KRH59064 | Soybean | extracellular | 60.27 | 59.46 |
| KRH42944 | Soybean | extracellular | 59.25 | 58.84 |
| KRH41530 | Soybean | nucleus | 54.11 | 55.83 |
| KRH73676 | Soybean | extracellular | 51.71 | 53.36 |
| KRH14468 | Soybean | extracellular | 52.4 | 53.12 |
| KRH76320 | Soybean | nucleus | 52.05 | 52.6 |
| KRG98913 | Soybean | vacuole | 51.71 | 52.43 |
| KRH39331 | Soybean | nucleus | 51.71 | 52.25 |
| KRG94750 | Soybean | endoplasmic reticulum | 48.97 | 48.47 |
| KRH06776 | Soybean | endoplasmic reticulum | 48.63 | 48.14 |
| KRH70105 | Soybean | nucleus | 50.68 | 47.9 |
| KRH58172 | Soybean | extracellular, vacuole | 47.26 | 47.42 |
| KRH22496 | Soybean | extracellular | 46.92 | 47.24 |
| KRH25426 | Soybean | extracellular | 47.95 | 46.98 |
| KRH35625 | Soybean | vacuole | 47.26 | 46.62 |
| KRH56088 | Soybean | vacuole | 47.26 | 46.46 |
| KRH26853 | Soybean | vacuole | 46.92 | 46.28 |
| KRG91154 | Soybean | extracellular | 46.92 | 46.28 |
| KRH04364 | Soybean | extracellular | 46.23 | 46.23 |
| KRH77174 | Soybean | extracellular | 44.86 | 44.26 |
| KRG91233 | Soybean | extracellular | 44.86 | 43.52 |
| KRG94748 | Soybean | extracellular, vacuole | 38.36 | 43.24 |
| KRH28311 | Soybean | extracellular, vacuole | 43.84 | 43.1 |
| KRH35587 | Soybean | extracellular | 44.52 | 43.05 |
| KRH06775 | Soybean | endoplasmic reticulum | 50.0 | 42.32 |
Protein Annotations
| EntrezGene:100801634 | Gene3D:2.60.120.200 | MapMan:50.2.4 | EMBL:ACUP02010329 | InterPro:ConA-like_dom_sf | InterPro:GH16 |
| InterPro:GH16_AS | EnsemblPlantsGene:GLYMA_17G065300 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 |
| UniProt:I1MSS9 | InterPro:IPR000757 | EnsemblPlants:KRH02894 | ProteinID:KRH02894 | ProteinID:KRH02894.1 | PFAM:PF00722 |
| PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF100 |
| SUPFAM:SSF49899 | SignalP:SignalP-noTM | UniParc:UPI00023D55B0 | InterPro:XET_C | InterPro:XTH | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:+:5041276..5042804
Molecular Weight (calculated)
32612.8 Da
IEP (calculated)
6.115
GRAVY (calculated)
-0.398
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLHSITFS TKTVLYVFVL ASSIAASAGN FYQDFDVTWG DGRAKILNNG DLLTLSLDKA SGSGFQSKNE YLFGKIDMQL KLVPGNSAGT VTAYYLSSKG
101: SNWDEIDFEF LGNLSGDPYI LHTNVFSQGK GSREQQFYLW FDPTADFHTY SILWNPQRII FSVDGTPIRE FKNMESKGVA FPKEQPMRIY SSLWNADDWA
201: TRGGLVKTDW TQAPFTASYR NFNANACVHS GSSSSSSSCT ANSSSSNAWF SQQLDSTSQD RLSWVQKNYM IYNYCTDTKR FPQGLPPECQ TS
101: SNWDEIDFEF LGNLSGDPYI LHTNVFSQGK GSREQQFYLW FDPTADFHTY SILWNPQRII FSVDGTPIRE FKNMESKGVA FPKEQPMRIY SSLWNADDWA
201: TRGGLVKTDW TQAPFTASYR NFNANACVHS GSSSSSSSCT ANSSSSNAWF SQQLDSTSQD RLSWVQKNYM IYNYCTDTKR FPQGLPPECQ TS
001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
Arabidopsis Description
XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.