CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19006	Soybean	vacuole	92.44	91.81
KRH19005	Soybean	vacuole	70.79	72.28
KRH02892	Soybean	extracellular	71.13	72.13
KRH02893	Soybean	extracellular	70.1	71.58
KRH02890	Soybean	extracellular	70.1	71.58
KRH19003	Soybean	extracellular	70.45	71.43
KRH02894	Soybean	endoplasmic reticulum, extracellular	71.13	70.89
KRH19002	Soybean	extracellular	69.42	70.88
KRH19136	Soybean	nucleus	68.38	70.32
GSMUA_Achr6P30850_001	Banana	extracellular	67.35	69.5
GSMUA_Achr10P...	Banana	extracellular	66.67	68.79
KRH02895	Soybean	cytosol	69.07	68.6
KRH37378	Soybean	nucleus	62.2	68.05
Solyc07g006860.2.1	Tomato	extracellular	65.98	67.37
PGSC0003DMT400048241	Potato	extracellular	64.95	66.32
GSMUA_Achr10P...	Banana	extracellular	64.95	65.62
KRH31558	Soybean	nucleus	60.82	64.13
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	52.23	63.6
HORVU7Hr1G098370.1	Barley	extracellular	61.86	63.16
TraesCS7B01G327400.1	Wheat	extracellular	61.86	63.16
TraesCS7A01G427100.1	Wheat	extracellular	61.86	63.16
TraesCS7A01G427300.1	Wheat	extracellular	61.51	62.81
Os06t0696600-01	Rice	extracellular	61.86	62.5
TraesCS7D01G419400.1	Wheat	vacuole	61.51	62.37
AT2G18800.1	Thale cress	extracellular	65.29	62.3
KRG97361	Soybean	nucleus	59.45	62.01
KRH58823	Soybean	extracellular, nucleus	60.14	61.84
KRH42721	Soybean	extracellular, nucleus	59.79	61.48
EER90302	Sorghum	extracellular	60.48	61.11
CDY49308	Canola	extracellular	64.95	60.19
KRH59064	Soybean	extracellular	58.42	57.43
KRH12375	Soybean	extracellular	61.86	56.96
KRH41530	Soybean	nucleus	55.33	56.89
KRH42944	Soybean	extracellular	57.39	56.8
CDY13000	Canola	endoplasmic reticulum, extracellular, nucleus	63.23	56.27
KRH76320	Soybean	nucleus	52.92	53.29
KRH39331	Soybean	nucleus	52.92	53.29
KRG98913	Soybean	vacuole	49.48	50.0
KRH73676	Soybean	extracellular	48.45	49.82
KRH14468	Soybean	extracellular	48.45	48.96
KRH58172	Soybean	extracellular, vacuole	47.77	47.77
KRH04364	Soybean	extracellular	47.08	46.92
KRH06776	Soybean	endoplasmic reticulum	47.42	46.78
KRG94750	Soybean	endoplasmic reticulum	47.08	46.44
KRH22496	Soybean	extracellular	46.05	46.21
KRH70105	Soybean	nucleus	48.45	45.63
Zm00001d014615_P002	Maize	extracellular	59.11	45.62
Zm00001d014614_P001	Maize	nucleus, plastid	59.11	45.62
KRG91154	Soybean	extracellular	45.7	44.93
KRH77174	Soybean	extracellular	45.7	44.93
KRH25426	Soybean	extracellular	45.7	44.63
KRH35625	Soybean	vacuole	45.36	44.59
KRH56088	Soybean	vacuole	45.36	44.44
KRH28311	Soybean	extracellular, vacuole	45.36	44.44
KRH26853	Soybean	vacuole	45.02	44.26
KRG94748	Soybean	extracellular, vacuole	37.46	42.08
KRG91233	Soybean	extracellular	43.3	41.86
KRH35587	Soybean	extracellular	42.27	40.73
KRH06775	Soybean	endoplasmic reticulum	46.74	39.42

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A0R4J5H9	EMBL:ACUP02010329	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	EnsemblPlantsGene:GLYMA_17G064900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	EnsemblPlants:KRH02889	ProteinID:KRH02889	ProteinID:KRH02889.1	PFAM:PF00722
PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062
PANTHER:PTHR31062:SF63	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001B63975	InterPro:XET_C
InterPro:XTH	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:5020764..5024798

Molecular Weight (calculated)

33026.1 Da

IEP (calculated)

8.636

GRAVY (calculated)

-0.334

Length

291 amino acids

Sequence
(BLAST)

001: MVPCVKAMVA LVLAFLISLP SMVAYAGNMY QDVDVTWGDG RGKILNNGQL LTLSLDRASG SGFQSKNQYL FGKIDMQIKL VPANSAGTVT AFYLRSEGSS
101: WDEIDFEFLG NLSGDPYIVH TNVYTQGKGN REQQFYLWFD PTADFHTYSF LWNPTHVVFY VDGRPIREFK NLEGVGVEYP KKQPMRLYAS LWNADDWATR
201: GGLVKTDWSQ APFTASFRNF KANGCVWSNG VSSCNSTSSS EKAWLYSQRL DSTNQKKLKW VHKNYMIYDY CTDLKRFPQG LPLECTVRTK S

Best Arabidopsis Sequence Match ( AT2G18800.1 )
(BLAST)

001: MVSSTLLVMS ISLFLGLSIL LVVHGKDFNQ DIDITWGDGR GNILNNGTLL NLGLDQSSGS GFQSKAEYLY GKVDMQIKLV PGNSAGTVTT FYLKSQGLTW
101: DEIDFEFLGN VSGDPYIVHT NVYTQGKGDR EQQFYLWFDP TAAFHNYSIL WNPSHIVFYI DGKPIREFKN LEVLGVAYPK NQPMRMYGSL WNADDWATRG
201: GLVKTNWSQG PFVASFMNYN SENACVWSIV NGTTTTSPCS PGDSTSSSSS STSEWFSQRG MDSSSKKVLR WVQRKFMVYN YCKDKKRFSN GLPVECTAKN
301: KNTKS

Arabidopsis Description

XTH21Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VQ29]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.