Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42944 | Soybean | extracellular | 93.92 | 94.56 |
| VIT_10s0003g02440.t01 | Wine grape | extracellular | 62.5 | 67.77 |
| KRH31558 | Soybean | nucleus | 61.15 | 65.58 |
| KRG97361 | Soybean | nucleus | 61.49 | 65.23 |
| KRH42721 | Soybean | extracellular, nucleus | 60.47 | 63.25 |
| KRH58823 | Soybean | extracellular, nucleus | 60.14 | 62.9 |
| KRH19002 | Soybean | extracellular | 60.47 | 62.81 |
| KRH02892 | Soybean | extracellular | 60.81 | 62.72 |
| KRH19005 | Soybean | vacuole | 60.14 | 62.46 |
| KRH19003 | Soybean | extracellular | 60.47 | 62.37 |
| KRH19136 | Soybean | nucleus | 59.46 | 62.19 |
| KRH02893 | Soybean | extracellular | 59.8 | 62.11 |
| KRH02890 | Soybean | extracellular | 59.8 | 62.11 |
| KRH37378 | Soybean | nucleus | 55.07 | 61.28 |
| KRH02894 | Soybean | endoplasmic reticulum, extracellular | 59.46 | 60.27 |
| KRH02889 | Soybean | extracellular | 57.43 | 58.42 |
| KRH19006 | Soybean | vacuole | 57.43 | 58.02 |
| KRH02895 | Soybean | cytosol | 56.76 | 57.34 |
| KRH39331 | Soybean | nucleus | 51.35 | 52.6 |
| KRH73676 | Soybean | extracellular | 50.0 | 52.3 |
| KRH76320 | Soybean | nucleus | 50.68 | 51.9 |
| KRH12375 | Soybean | extracellular | 55.41 | 51.9 |
| KRH14468 | Soybean | extracellular | 50.0 | 51.39 |
| KRH41530 | Soybean | nucleus | 48.31 | 50.53 |
| KRG98913 | Soybean | vacuole | 48.65 | 50.0 |
| KRH04364 | Soybean | extracellular | 45.61 | 46.23 |
| KRH77174 | Soybean | extracellular | 45.95 | 45.95 |
| KRH58172 | Soybean | extracellular, vacuole | 44.93 | 45.7 |
| KRH22496 | Soybean | extracellular | 44.59 | 45.52 |
| KRH35625 | Soybean | vacuole | 45.27 | 45.27 |
| KRH28311 | Soybean | extracellular, vacuole | 44.93 | 44.78 |
| KRH06776 | Soybean | endoplasmic reticulum | 44.59 | 44.75 |
| KRG91154 | Soybean | extracellular | 44.59 | 44.59 |
| KRG94750 | Soybean | endoplasmic reticulum | 44.26 | 44.41 |
| KRH25426 | Soybean | extracellular | 44.59 | 44.3 |
| KRH26853 | Soybean | vacuole | 43.92 | 43.92 |
| KRH56088 | Soybean | vacuole | 43.24 | 43.1 |
| KRH70105 | Soybean | nucleus | 43.92 | 42.07 |
| KRG91233 | Soybean | extracellular | 42.23 | 41.53 |
| KRH35587 | Soybean | extracellular | 42.23 | 41.39 |
| KRG94748 | Soybean | extracellular, vacuole | 36.15 | 41.31 |
| KRH06775 | Soybean | endoplasmic reticulum | 43.92 | 37.68 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EMBL:ACUP02003299 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf | InterPro:GH16 |
| InterPro:GH16_AS | EnsemblPlantsGene:GLYMA_05G163900 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 |
| UniProt:I1K447 | InterPro:IPR000757 | EnsemblPlants:KRH59064 | ProteinID:KRH59064 | ProteinID:KRH59064.1 | PFAM:PF00722 |
| PFAM:PF06955 | PIRSF:PIRSF005604 | PRINTS:PR00737 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 |
| PANTHER:PTHR31062:SF62 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000233A0C3 | InterPro:XET_C |
| InterPro:XTH | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:35499719..35501510
Molecular Weight (calculated)
34008.1 Da
IEP (calculated)
8.503
GRAVY (calculated)
-0.360
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKYETYLRV SALLLASLLM CLFGVTAEGN FYEDIDITWG EHGGVNILGS NSLVLSLDQS SGSGFRSKAE YLYGRIDMQI KLVSGNSAGT VTAYYLSSEG
101: PNHDEIDFEF LGNLSGEPYI VHTNIYTQGI GNREQQFYLW FDPTKHFHTY TIVWNPQRII FMVDSIPIRV FNNYEARGVP FASSQPMRLY SSLWCADQWA
201: TKGGLVKTNW SFAPFKAYYR NFDAKACVWS KGSSSCPSNS ASMTHYNNTW QAQDLDAYGR RSLRWVQKYY MIYSYCKDYK RFPQGRPREC RLSRFS
101: PNHDEIDFEF LGNLSGEPYI VHTNIYTQGI GNREQQFYLW FDPTKHFHTY TIVWNPQRII FMVDSIPIRV FNNYEARGVP FASSQPMRLY SSLWCADQWA
201: TKGGLVKTNW SFAPFKAYYR NFDAKACVWS KGSSSCPSNS ASMTHYNNTW QAQDLDAYGR RSLRWVQKYY MIYSYCKDYK RFPQGRPREC RLSRFS
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.