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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038819.1-P Field mustard cytosol, extracellular, nucleus 75.16 98.74
AT2G18800.1 Thale cress extracellular 84.08 86.56
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 90.13 86.54
KRH19006 Soybean vacuole 61.78 66.21
CDY66832 Canola extracellular 57.01 66.05
CDY14905 Canola extracellular 56.69 65.68
GSMUA_Achr6P30850_001 Banana extracellular 58.6 65.25
CDY59999 Canola extracellular 51.27 65.18
KRH02889 Soybean extracellular 60.19 64.95
Solyc07g006860.2.1 Tomato extracellular 58.92 64.91
PGSC0003DMT400048241 Potato extracellular 58.6 64.56
CDY28174 Canola extracellular 57.96 64.54
CDY39193 Canola extracellular 55.73 64.34
CDX68640 Canola extracellular 57.64 64.18
GSMUA_Achr10P... Banana extracellular 57.32 63.83
CDY67487 Canola extracellular 52.55 63.46
CDY25903 Canola extracellular 52.55 63.46
CDX72228 Canola extracellular 56.37 63.44
CDY25904 Canola extracellular 56.05 61.97
CDY67778 Canola extracellular 55.73 61.62
CDX89393 Canola extracellular 56.05 61.32
CDX72227 Canola extracellular 52.55 60.89
GSMUA_Achr10P... Banana extracellular 55.73 60.76
CDX94413 Canola extracellular 55.41 60.63
Os06t0696600-01 Rice extracellular 53.18 57.99
EER90302 Sorghum extracellular 53.18 57.99
CDY59998 Canola extracellular 51.91 57.6
TraesCS7B01G327400.1 Wheat extracellular 52.23 57.54
CDY03539 Canola endoplasmic reticulum, extracellular 57.01 57.37
CDY02738 Canola extracellular, nucleus, vacuole 39.17 57.21
TraesCS7A01G427100.1 Wheat extracellular 51.91 57.19
HORVU7Hr1G098370.1 Barley extracellular 51.91 57.19
TraesCS7A01G427300.1 Wheat extracellular 51.59 56.84
TraesCS7D01G419400.1 Wheat vacuole 51.91 56.79
CDY69806 Canola extracellular 50.96 56.34
CDY11863 Canola extracellular 51.27 56.29
CDX88627 Canola extracellular 50.64 55.59
CDY67488 Canola extracellular 50.0 55.48
CDY50186 Canola extracellular 50.32 55.24
CDX92733 Canola extracellular 50.0 54.9
CDY67779 Canola extracellular 50.0 54.9
CDY27126 Canola extracellular 50.32 54.67
CDY02741 Canola extracellular 50.64 54.08
CDY61576 Canola vacuole 47.77 53.57
CDY12366 Canola extracellular 43.31 47.89
CDY09832 Canola vacuole 43.31 46.42
CDX69621 Canola vacuole 43.31 46.42
CDY08756 Canola extracellular 42.04 46.32
CDY45623 Canola extracellular 41.72 45.96
CDY35228 Canola extracellular 42.68 45.89
CDX78542 Canola vacuole 42.99 45.3
CDY06861 Canola extracellular 42.04 45.21
CDX93096 Canola extracellular 42.36 45.08
CDX70524 Canola vacuole 42.68 44.97
CDY69237 Canola extracellular 42.04 44.75
CDX72656 Canola extracellular, vacuole 40.45 43.49
CDY31620 Canola extracellular, vacuole 40.13 43.0
CDY22110 Canola extracellular 39.49 42.76
CDY21985 Canola extracellular 39.49 42.76
CDX90896 Canola extracellular 38.85 42.07
Zm00001d014614_P001 Maize nucleus, plastid 50.32 41.91
Zm00001d014615_P002 Maize extracellular 50.32 41.91
CDY53771 Canola extracellular 38.53 41.72
CDX71167 Canola vacuole 38.85 41.08
CDY49788 Canola extracellular 36.62 38.46
CDX97967 Canola extracellular 36.31 38.13
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078IJQ6UniProt:A0A078IJQ6EnsemblPlants:CDY49308
ProteinID:CDY49308ProteinID:CDY49308.1InterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_ASGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623
GO:GO:0005975GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411
GO:GO:0016043GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0016798GO:GO:0030312
GO:GO:0042546GO:GO:0048046GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00092733001InterPro:IPR000757PFAM:PF00722
PFAM:PF06955PIRSF:PIRSF005604ScanProsite:PS01034PFscan:PS51762PANTHER:PTHR31062PANTHER:PTHR31062:SF101
SUPFAM:SSF49899SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF0F32InterPro:XET_CInterPro:XTH
SEG:seg:::::
Description
BnaA07g01590DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078IJQ6]
Coordinates
chrLK032824:-:53015..54281
Molecular Weight (calculated)
35460.8 Da
IEP (calculated)
8.764
GRAVY (calculated)
-0.427
Length
314 amino acids
Sequence
(BLAST)
001: MASQALLVMS LIIILGLNIF LVAHANYLNQ DIDITWGDGR GKFLNNDTLL NLTLDQSSGS GFQSKAEYLY GKVDMQIKLV PGNSAGTVTT FYLKSQGLTW
101: DEIDFEFLGN VSGDPYILHT NVYTQGKGDR EQQFYLWFDP TAEFHNYSIL WNPSHIVFYV DGKPIREFKN LEAMGVAYPK SQPMRMYGSL WNADDWATRG
201: GLVKTNWSEG PFVASFINYN SENACIWSID NGTTTNTPCS PSGSSSSSSS TSTSEWFSQR GMDSSSRKVL KWVQKKFMVY NYCKDKKRFW QGLPVECGAK
301: KNIKNKNKNK NIKS
Best Arabidopsis Sequence Match ( AT2G18800.1 )
(BLAST)
001: MVSSTLLVMS ISLFLGLSIL LVVHGKDFNQ DIDITWGDGR GNILNNGTLL NLGLDQSSGS GFQSKAEYLY GKVDMQIKLV PGNSAGTVTT FYLKSQGLTW
101: DEIDFEFLGN VSGDPYIVHT NVYTQGKGDR EQQFYLWFDP TAAFHNYSIL WNPSHIVFYI DGKPIREFKN LEVLGVAYPK NQPMRMYGSL WNADDWATRG
201: GLVKTNWSQG PFVASFMNYN SENACVWSIV NGTTTTSPCS PGDSTSSSSS STSEWFSQRG MDSSSKKVLR WVQRKFMVYN YCKDKKRFSN GLPVECTAKN
301: KNTKS
Arabidopsis Description
XTH21Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VQ29]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.