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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000840.1-P Field mustard extracellular 98.97 98.97
CDY53771 Canola extracellular 98.97 98.97
CDY21985 Canola extracellular 97.24 97.24
CDY22110 Canola extracellular 95.86 95.86
AT4G03210.1 Thale cress extracellular 90.69 90.69
KRH22496 Soybean extracellular 71.03 71.03
KRH26853 Soybean vacuole 70.69 69.26
VIT_12s0134g00160.t01 Wine grape extracellular 68.62 67.23
KRH25426 Soybean extracellular 68.62 66.78
Solyc07g052980.2.1 Tomato extracellular 67.59 66.22
KRH56088 Soybean vacuole 67.59 65.99
PGSC0003DMT400067358 Potato extracellular 66.55 65.2
GSMUA_Achr9P29980_001 Banana extracellular, vacuole 57.24 62.17
GSMUA_Achr6P19100_001 Banana extracellular, vacuole 56.55 60.74
EER91282 Sorghum extracellular, vacuole 55.17 49.69
EES11493 Sorghum extracellular, vacuole 55.17 49.23
CDX69621 Canola vacuole 49.31 48.81
CDY09832 Canola vacuole 49.31 48.81
CDY45623 Canola extracellular 47.59 48.42
CDY08756 Canola extracellular 47.59 48.42
CDY61576 Canola vacuole 46.55 48.21
CDY28174 Canola extracellular 46.55 47.87
Zm00001d002193_P003 Maize extracellular, vacuole 55.52 47.77
CDX70524 Canola vacuole 48.97 47.65
CDX78542 Canola vacuole 48.97 47.65
CDY39193 Canola extracellular 44.48 47.43
CDY14905 Canola extracellular 44.14 47.23
CDY66832 Canola extracellular 44.14 47.23
CDX68640 Canola extracellular 45.86 47.16
CDX93096 Canola extracellular 47.93 47.12
CDY02738 Canola extracellular, nucleus, vacuole 34.83 46.98
CDX72656 Canola extracellular, vacuole 47.24 46.92
CDY69237 Canola extracellular 47.59 46.78
CDY27126 Canola extracellular 46.55 46.71
CDX94413 Canola extracellular 46.21 46.69
CDX89393 Canola extracellular 46.21 46.69
CDX72228 Canola extracellular 44.83 46.59
CDY31620 Canola extracellular, vacuole 46.9 46.42
CDY25904 Canola extracellular 45.17 46.13
CDY67778 Canola extracellular 44.83 45.77
CDX72227 Canola extracellular 42.07 45.02
CDY49788 Canola extracellular 45.86 44.48
CDX97967 Canola extracellular 45.86 44.48
CDY59998 Canola extracellular 42.76 43.82
CDY67488 Canola extracellular 42.76 43.82
CDY59999 Canola extracellular 37.24 43.72
CDY11863 Canola extracellular 42.76 43.36
CDY69806 Canola extracellular 42.41 43.31
CDX71167 Canola vacuole 44.14 43.1
CDY67487 Canola extracellular 38.62 43.08
CDY67779 Canola extracellular 42.41 43.01
CDX88627 Canola extracellular 42.41 43.01
CDY25903 Canola extracellular 38.28 42.69
CDX92733 Canola extracellular 41.72 42.31
CDY50186 Canola extracellular 41.38 41.96
CDY06861 Canola extracellular 41.38 41.1
CDY03539 Canola endoplasmic reticulum, extracellular 44.14 41.03
CDY35228 Canola extracellular 40.69 40.41
CDY49308 Canola extracellular 42.07 38.85
CDY12366 Canola extracellular 37.93 38.73
CDY02741 Canola extracellular 37.93 37.41
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 42.07 37.31
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078DNR3InterPro:Beta_glucanaseEnsemblPlants:CDX90896
ProteinID:CDX90896ProteinID:CDX90896.1InterPro:ConA-like_dom_sfInterPro:GH16GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0005975
GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411GO:GO:0016043
GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0016798GO:GO:0030312GO:GO:0042546
GO:GO:0048046GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00151626001InterPro:IPR000757PFAM:PF00722PFAM:PF06955
PIRSF:PIRSF005604PRINTS:PR00737PFscan:PS51762PANTHER:PTHR31062PANTHER:PTHR31062:SF11SUPFAM:SSF49899
SignalP:SignalP-noTMUniParc:UPI0004EEA739InterPro:XET_CInterPro:XTHSEG:seg:
Description
BnaA03g25760D
Coordinates
chrLK031864:-:1185582..1186877
Molecular Weight (calculated)
33085.9 Da
IEP (calculated)
5.023
GRAVY (calculated)
-0.325
Length
290 amino acids
Sequence
(BLAST)
001: MVGMGWFMCM MMVVCVISCG EAAPGARFED LYRSSWAMDH CVNDGEVTKL KLDNSSGAGF ESRSKYLFGK VSIQIKLVEG DSAGTVTAFY MSSEGSNHNE
101: FDFEFLGNTT GEPYIVQTNV YVNGVGNREQ RLNLWFDPTT EFHTYSILWS KRSVVFMVDE TPIRVHKNLE DKGIPFAKDQ AMGVYSSIWN ADDWATQGGL
201: VKTDWSHAPF IASYKDFKID ACEVPTTTDL SKCNGEDQRF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CYDAARFPVT PLECQHHRHL
Best Arabidopsis Sequence Match ( AT4G03210.1 )
(BLAST)
001: MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL
Arabidopsis Description
XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.