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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole, extracellular, nucleus

Predictor Summary:
  • nucleus 2
  • vacuole 1
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, nucleus, vacuole
Any Predictor:extracellular, nucleus, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020436.1-P Field mustard extracellular 89.3 67.84
CDY67488 Canola extracellular 89.3 67.84
CDY67779 Canola extracellular 88.37 66.43
CDY11863 Canola extracellular 87.91 66.08
CDX88627 Canola extracellular 87.44 65.73
AT5G57540.1 Thale cress extracellular 85.58 64.79
AT5G57530.1 Thale cress extracellular 85.12 64.21
GSMUA_Achr10P... Banana cytosol 54.88 59.3
GSMUA_Achr4P02240_001 Banana cytosol, mitochondrion, nucleus 52.56 58.55
CDY69806 Canola extracellular 75.35 57.04
CDY50186 Canola extracellular 75.35 56.64
CDX92733 Canola extracellular 75.35 56.64
GSMUA_Achr3P05200_001 Banana cytosol, plastid, vacuole 50.23 54.82
GSMUA_Achr3P05220_001 Banana cytosol 53.02 54.81
GSMUA_Achr9P13820_001 Banana cytosol 52.56 54.07
GSMUA_Achr5P21880_001 Banana cytosol 53.02 53.52
GSMUA_Achr7P16430_001 Banana cytosol 53.02 53.52
TraesCS7D01G418700.1 Wheat cytosol, mitochondrion, nucleus 53.02 51.12
CDY59999 Canola extracellular 53.02 46.15
CDX89393 Canola extracellular 61.4 45.99
CDX94413 Canola extracellular 61.4 45.99
TraesCS7D01G419200.1 Wheat extracellular 60.93 45.8
TraesCS7A01G427000.1 Wheat extracellular 60.93 45.8
CDY25904 Canola extracellular 60.47 45.77
HORVU7Hr1G098320.3 Barley vacuole 61.4 45.67
TraesCS7D01G419100.1 Wheat extracellular 60.93 45.49
TraesCS7A01G426900.1 Wheat extracellular 60.47 45.45
TraesCS7B01G327200.1 Wheat extracellular 60.47 45.45
CDY67778 Canola extracellular 60.0 45.42
CDY61576 Canola vacuole 59.07 45.36
TraesCS7B01G327000.1 Wheat extracellular 61.4 45.21
HORVU0Hr1G022110.1 Barley extracellular, vacuole 61.4 45.21
Os06t0697000-02 Rice extracellular 60.93 45.17
TraesCS7D01G419300.1 Wheat extracellular 60.93 45.17
PGSC0003DMT400048242 Potato extracellular 58.6 45.16
TraesCS7A01G426100.1 Wheat vacuole 60.47 44.98
HORVU7Hr1G098260.1 Barley vacuole 60.93 44.86
CDY27126 Canola extracellular 60.0 44.64
TraesCS7B01G326900.1 Wheat extracellular 60.0 44.64
TraesCS7A01G426700.1 Wheat extracellular 60.0 44.64
CDY25903 Canola extracellular 53.95 44.62
EER88885 Sorghum extracellular 60.47 44.52
CDY39193 Canola extracellular 56.28 44.49
TraesCS7A01G426600.1 Wheat vacuole 60.0 44.48
Os06t0696400-01 Rice extracellular 60.47 44.37
CDY67487 Canola extracellular 53.49 44.23
Solyc07g006870.2.1 Tomato extracellular, vacuole 57.67 43.97
HORVU7Hr1G098440.2 Barley extracellular 58.14 43.71
CDX72228 Canola extracellular 56.28 43.37
TraesCS7A01G427600.1 Wheat extracellular 58.14 43.25
TraesCS7D01G419900.1 Wheat extracellular 57.67 43.21
TraesCS7B01G327700.1 Wheat extracellular 58.14 43.1
Zm00001d014613_P001 Maize plasma membrane 58.14 43.1
EER90303 Sorghum extracellular, golgi, vacuole 60.0 42.86
CDY66832 Canola extracellular 53.95 42.8
CDX72227 Canola extracellular 53.95 42.8
CDY14905 Canola extracellular 53.95 42.8
Zm00001d014617_P001 Maize extracellular 59.07 42.62
CDX68640 Canola extracellular 55.81 42.55
CDY28174 Canola extracellular 55.81 42.55
CDY59998 Canola extracellular 55.81 42.4
TraesCS7D01G418600.1 Wheat vacuole 61.86 41.69
Zm00001d009309_P001 Maize extracellular, vacuole 53.49 41.52
CDY49308 Canola extracellular 57.21 39.17
CDX69621 Canola vacuole 52.56 38.57
CDY09832 Canola vacuole 52.56 38.57
CDY02741 Canola extracellular 51.63 37.76
CDY69237 Canola extracellular 51.63 37.63
CDX70524 Canola vacuole 52.09 37.58
CDX78542 Canola vacuole 52.09 37.58
CDY12366 Canola extracellular 49.3 37.32
CDX93096 Canola extracellular 51.16 37.29
CDY03539 Canola endoplasmic reticulum, extracellular 53.95 37.18
CDY35228 Canola extracellular 50.23 36.99
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 55.81 36.7
CDY06861 Canola extracellular 49.77 36.64
CDX72656 Canola extracellular, vacuole 48.37 35.62
CDY45623 Canola extracellular 46.98 35.44
CDY08756 Canola extracellular 46.98 35.44
CDY53771 Canola extracellular 47.44 35.17
CDY31620 Canola extracellular, vacuole 47.91 35.15
CDX90896 Canola extracellular 46.98 34.83
CDY21985 Canola extracellular 46.98 34.83
CDY22110 Canola extracellular 46.98 34.83
CDX71167 Canola vacuole 46.51 33.67
CDX97967 Canola extracellular 46.05 33.11
CDY49788 Canola extracellular 46.05 33.11
HORVU7Hr1G098280.1 Barley extracellular, mitochondrion, vacuole 60.93 32.75
Protein Annotations
EnsemblPlants:CDY02738EnsemblPlantsGene:GSBRNA2T00114892001Gene3D:2.60.120.200GO:A0A078ET29GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:ConA-like_dom_sf
InterPro:GH16InterPro:IPR000757PANTHER:PTHR31062PANTHER:PTHR31062:SF20PFAM:PF00722PFscan:PS51762
ProteinID:CDY02738ProteinID:CDY02738.1SUPFAM:SSF49899UniParc:UPI0004EE485FMapMan:50.2.4:
Description
BnaC02g11510D
Coordinates
chrLK031937:-:1246..2228
Molecular Weight (calculated)
24388.8 Da
IEP (calculated)
7.443
GRAVY (calculated)
-0.255
Length
215 amino acids
Sequence
(BLAST)
001: MNLKFINIHE ISISGSGFQS KKEYLFGKID MKMKLVAGNS AGTVTAYFLM FSQLSSKGET WDEIDFKFLG NVTGQPYVLH TNVFTGGKGN REMQFYLWFN
101: PTTDFHSYTV LWNPLNIIFL VDGIPIRVFK NNEAHGVAYP KSQPMKIYSS LWEADDWATQ GGRVKTDWPN APYSAYYRSF SDVDCCSRSS IWNWVTCNAN
201: SNSFPLGLPT ECNLG
Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.