Factsheet for AT5G57540.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 8
vacuole 4
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88627	Canola	extracellular	94.72	94.06
CDY11863	Canola	extracellular	94.37	93.71
CDY67779	Canola	extracellular	94.01	93.36
Bra002723.1-P	Field mustard	extracellular	94.01	93.36
AT5G57530.1	Thale cress	extracellular	92.96	92.63
CDY67488	Canola	extracellular	90.85	91.17
Bra020436.1-P	Field mustard	extracellular	90.49	90.81
CDY02738	Canola	extracellular, nucleus, vacuole	64.79	85.58
Bra006814.1-P	Field mustard	extracellular	93.66	83.39
AT4G25820.1	Thale cress	extracellular	80.28	79.44
GSMUA_Achr10P...	Banana	cytosol	50.0	71.36
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	47.18	69.43
GSMUA_Achr3P05220_001	Banana	cytosol	48.59	66.35
GSMUA_Achr9P13820_001	Banana	cytosol	48.59	66.03
GSMUA_Achr5P21880_001	Banana	cytosol	48.59	64.79
GSMUA_Achr7P16430_001	Banana	cytosol	47.89	63.85
HORVU7Hr1G098320.3	Barley	vacuole	61.97	60.9
Os06t0697000-02	Rice	extracellular	61.97	60.69
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	47.54	60.54
TraesCS7D01G419300.1	Wheat	extracellular	61.62	60.34
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	61.97	60.27
TraesCS7A01G427000.1	Wheat	extracellular	60.56	60.14
TraesCS7A01G426900.1	Wheat	extracellular	60.56	60.14
TraesCS7B01G327000.1	Wheat	extracellular	61.62	59.93
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	41.55	59.9
TraesCS7A01G426100.1	Wheat	vacuole	60.92	59.86
AT5G57550.1	Thale cress	extracellular	59.86	59.86
TraesCS7B01G327200.1	Wheat	extracellular	60.21	59.79
AT4G25810.1	Thale cress	extracellular	60.21	59.79
TraesCS7D01G419200.1	Wheat	extracellular	59.86	59.44
TraesCS7D01G419100.1	Wheat	extracellular	60.21	59.38
TraesCS7A01G426600.1	Wheat	vacuole	60.56	59.31
HORVU7Hr1G098260.1	Barley	vacuole	60.92	59.25
TraesCS7B01G326900.1	Wheat	extracellular	60.21	59.17
AT4G30270.1	Thale cress	extracellular	55.99	59.11
VIT_11s0052g01230.t01	Wine grape	cytosol	57.75	58.99
TraesCS7A01G426700.1	Wheat	extracellular	59.86	58.82
AT5G57560.1	Thale cress	extracellular	58.45	58.45
PGSC0003DMT400048242	Potato	extracellular	57.04	58.06
EER90303	Sorghum	extracellular, golgi, vacuole	60.92	57.48
Solyc07g006870.2.1	Tomato	extracellular, vacuole	56.69	57.09
Zm00001d014617_P001	Maize	extracellular	59.86	57.05
EER88885	Sorghum	extracellular	58.1	56.51
AT4G14130.1	Thale cress	extracellular	57.39	56.4
AT3G23730.1	Thale cress	extracellular, vacuole	57.75	56.36
TraesCS7D01G419900.1	Wheat	extracellular	56.69	56.1
Os06t0696400-01	Rice	extracellular	57.75	55.97
HORVU7Hr1G098440.2	Barley	extracellular	56.34	55.94
TraesCS7A01G427600.1	Wheat	extracellular	56.69	55.71
TraesCS7B01G327700.1	Wheat	extracellular	56.69	55.52
Zm00001d014613_P001	Maize	plasma membrane	55.99	54.83
Zm00001d009309_P001	Maize	extracellular, vacuole	52.46	53.79
TraesCS7D01G418600.1	Wheat	vacuole	60.21	53.6
AT2G18800.1	Thale cress	extracellular	54.93	51.15
AT5G13870.2	Thale cress	extracellular, vacuole	49.65	48.12
AT2G06850.1	Thale cress	extracellular	48.59	46.62
AT4G28850.1	Thale cress	extracellular	47.89	46.58
AT5G65730.1	Thale cress	extracellular	46.13	44.86
AT4G37800.1	Thale cress	extracellular, vacuole	45.77	44.37
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	61.27	43.5
AT4G03210.1	Thale cress	extracellular	44.37	43.45
AT2G14620.1	Thale cress	vacuole	44.72	42.47
AT1G11545.1	Thale cress	extracellular	45.07	41.97

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EntrezGene:835858	ProteinID:AED96913.1	ArrayExpress:AT5G57540	EnsemblPlantsGene:AT5G57540
RefSeq:AT5G57540	TAIR:AT5G57540	RefSeq:AT5G57540-TAIR-G	EnsemblPlants:AT5G57540.1	TAIR:AT5G57540.1	ProteinID:BAB08789.1
InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	RefSeq:NP_200562.1	PFAM:PF00722	PFAM:PF06955
PIRSF:PIRSF005604	PO:PO:0000256	PO:PO:0000262	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	UniProt:Q9FKL8	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0000048C8F
InterPro:XET_C	InterPro:XTH	Symbol:XTH13	SEG:seg	:	:

Description

XTH13Putative xyloglucan endotransglucosylase/hydrolase protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL8]

Coordinates

chr5:-:23302787..23304095

Molecular Weight (calculated)

32177.0 Da

IEP (calculated)

5.049

GRAVY (calculated)

-0.248

Length

284 amino acids

Sequence
(BLAST)

001: MAAFTTKQSL LLLSLLLLIS LSAGSFYDNF DITWGNGRAN IVESGQLLTC TLDKISGSGF QSKKEYLFGK IDMKMKLVAG NSAGTVTAYY LSSKGETWDE
101: IDFEFLGNVT GQPYVLHTNV FTGGKGNREM QFYLWFDPTA DFHTYTVLWN PLNIIFLVDG IPIRVFKNNE ANGVAYPKSQ PMKIYSSLWE ADDWATQGGK
201: VKTDWTNAPF SASYKSFNDV DCCSRTSLLN WVTCNANSNS WMWTTLNSNQ YGQMKWVQDD YMIYNYCTDF KRFPQGLPTE CNLN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.