Factsheet for TraesCS7B01G327700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G419900.1	Wheat	extracellular	97.24	98.26
TraesCS7A01G427600.1	Wheat	extracellular	96.9	97.23
HORVU7Hr1G098440.2	Barley	extracellular	95.86	97.2
Os06t0696400-01	Rice	extracellular	87.24	86.35
EER88885	Sorghum	extracellular	82.41	81.85
Zm00001d009309_P001	Maize	extracellular, vacuole	76.21	79.78
Zm00001d014613_P001	Maize	plasma membrane	76.21	76.21
GSMUA_Achr9P13820_001	Banana	cytosol	53.1	73.68
GSMUA_Achr3P05220_001	Banana	cytosol	52.07	72.6
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	48.28	72.54
GSMUA_Achr7P16430_001	Banana	cytosol	52.07	70.89
GSMUA_Achr10P...	Banana	cytosol	47.93	69.85
GSMUA_Achr5P21880_001	Banana	cytosol	51.03	69.48
TraesCS7B01G327200.1	Wheat	extracellular	66.9	67.83
TraesCS7B01G326900.1	Wheat	extracellular	67.24	67.47
TraesCS7B01G327000.1	Wheat	extracellular	66.55	66.1
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	43.79	64.47
AT5G57550.1	Thale cress	extracellular	57.93	59.15
CDY25904	Canola	extracellular	57.93	59.15
Bra020434.1-P	Field mustard	extracellular	57.93	58.95
CDY02738	Canola	extracellular, nucleus, vacuole	43.1	58.14
CDY67778	Canola	extracellular	56.9	58.1
Bra002722.1-P	Field mustard	extracellular	56.9	58.1
Solyc07g006870.2.1	Tomato	extracellular, vacuole	56.21	57.8
PGSC0003DMT400048242	Potato	extracellular	55.52	57.71
VIT_11s0052g01230.t01	Wine grape	cytosol	55.17	57.55
AT4G25820.1	Thale cress	extracellular	56.9	57.49
CDY69806	Canola	extracellular	55.86	57.04
Bra013923.1-P	Field mustard	extracellular	55.86	57.04
CDY11863	Canola	extracellular	56.21	56.99
Bra020436.1-P	Field mustard	extracellular	55.52	56.89
CDY67488	Canola	extracellular	55.52	56.89
AT5G57530.1	Thale cress	extracellular	55.86	56.84
TraesCS7B01G327400.1	Wheat	extracellular	55.86	56.84
AT5G57540.1	Thale cress	extracellular	55.52	56.69
CDY67779	Canola	extracellular	55.52	56.29
Bra002723.1-P	Field mustard	extracellular	55.52	56.29
CDX88627	Canola	extracellular	55.52	56.29
CDX92733	Canola	extracellular	54.83	55.59
CDY50186	Canola	extracellular	54.48	55.24
Bra019141.1-P	Field mustard	extracellular	54.48	55.24
TraesCS2B01G454800.1	Wheat	extracellular	48.97	50.71
Bra006814.1-P	Field mustard	extracellular	54.83	49.84
PGSC0003DMT400048240	Potato	golgi	57.24	48.54
Solyc07g006850.1.1	Tomato	golgi	56.55	47.95
TraesCS2B01G455400.1	Wheat	extracellular	50.0	47.85
TraesCS6B01G368300.1	Wheat	extracellular	48.28	47.46
TraesCS2B01G104700.1	Wheat	extracellular	46.21	47.02
TraesCS7B01G364300.1	Wheat	extracellular	45.86	46.83
TraesCS7B01G327500.1	Wheat	extracellular, vacuole	48.28	46.82
TraesCS2B01G059000.1	Wheat	vacuole	46.55	46.39
TraesCS2B01G454600.1	Wheat	vacuole	47.24	45.97
TraesCS7B01G242900.1	Wheat	extracellular, vacuole	44.83	44.98
TraesCS2B01G454500.1	Wheat	extracellular	47.59	44.37
TraesCS2B01G526500.1	Wheat	vacuole	43.45	43.6
TraesCS2B01G526600.1	Wheat	extracellular	43.79	43.49
TraesCS2B01G244500.1	Wheat	extracellular	42.76	40.52

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF42	SUPFAM:SSF49899	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS7B01G327700	EnsemblPlants:TraesCS7B01G327700.1
InterPro:XET_C	InterPro:XTH	TIGR:cd02176	SEG:seg	:	:

Description

No Description!

Coordinates

chr7B:-:581893328..581894424

Molecular Weight (calculated)

32037.9 Da

IEP (calculated)

9.155

GRAVY (calculated)

-0.354

Length

290 amino acids

Sequence
(BLAST)

001: MRTVALGIVA MACLVAVARG GNFFQDSEMT WGDGRGKVVD GGRGLDLTLD KTSGSGFQSK TEYLFGKIDM QIKLVPGNSA GTVTTFYLSS QGAAHDEIDF
101: EFLGNVTGEP YTLHTNVFAK GQGQREQQFR LWFDPTKAFH TYSIIWNPQH VIFAVDGTAI RDFKNHEARG VSFPKSQPMR LYASLWNADD WATQGGRVKT
201: DWSKAPFVAS FRNFNADACV MSGGAQRCPA GTMEASAAGA NGGSGSWWNQ ELSGMGYRRM RWVQRKFMIY NYCTDPKRVA QGLPAECKLR

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.