Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024415.1-P | Field mustard | extracellular | 89.04 | 91.23 |
| CDY08756 | Canola | extracellular | 89.04 | 91.23 |
| CDY45623 | Canola | extracellular | 89.04 | 91.23 |
| KRH77174 | Soybean | extracellular | 75.0 | 73.99 |
| KRH04364 | Soybean | extracellular | 73.97 | 73.97 |
| KRH28311 | Soybean | extracellular, vacuole | 75.0 | 73.74 |
| KRH58172 | Soybean | extracellular, vacuole | 72.6 | 72.85 |
| AT4G37800.1 | Thale cress | extracellular, vacuole | 72.6 | 72.35 |
| PGSC0003DMT400055138 | Potato | extracellular | 72.95 | 72.2 |
| GSMUA_Achr8P26470_001 | Banana | extracellular | 70.55 | 72.03 |
| GSMUA_Achr3P26220_001 | Banana | extracellular | 70.55 | 72.03 |
| GSMUA_Achr8P05120_001 | Banana | extracellular | 70.21 | 71.68 |
| Solyc02g091920.2.1 | Tomato | nucleus | 71.92 | 71.19 |
| GSMUA_Achr1P10380_001 | Banana | extracellular, vacuole | 65.75 | 65.08 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 49.66 | 49.49 |
| AT4G03210.1 | Thale cress | extracellular | 46.92 | 47.24 |
| AT3G23730.1 | Thale cress | extracellular, vacuole | 46.58 | 46.74 |
| AT2G06850.1 | Thale cress | extracellular | 47.26 | 46.62 |
| AT5G57560.1 | Thale cress | extracellular | 45.21 | 46.48 |
| AT4G30270.1 | Thale cress | extracellular | 42.81 | 46.47 |
| AT4G14130.1 | Thale cress | extracellular | 45.89 | 46.37 |
| AT5G57550.1 | Thale cress | extracellular | 44.86 | 46.13 |
| AT5G57540.1 | Thale cress | extracellular | 44.86 | 46.13 |
| AT5G57530.1 | Thale cress | extracellular | 44.52 | 45.61 |
| AT4G25810.1 | Thale cress | extracellular | 44.52 | 45.45 |
| AT1G11545.1 | Thale cress | extracellular | 47.26 | 45.25 |
| AT4G25820.1 | Thale cress | extracellular | 43.84 | 44.6 |
| AT2G14620.1 | Thale cress | vacuole | 44.52 | 43.48 |
| AT2G18800.1 | Thale cress | extracellular | 43.49 | 41.64 |
| AT4G28850.1 | Thale cress | extracellular | 40.75 | 40.75 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:836702 | ProteinID:AED98096.1 | EMBL:AK227046 | ArrayExpress:AT5G65730 |
| EnsemblPlantsGene:AT5G65730 | RefSeq:AT5G65730 | TAIR:AT5G65730 | RefSeq:AT5G65730-TAIR-G | EnsemblPlants:AT5G65730.1 | TAIR:AT5G65730.1 |
| EMBL:AY044329 | EMBL:AY057564 | EMBL:AY084968 | EMBL:AY093983 | ProteinID:BAB10680.1 | ProteinID:CAA16685.1 |
| InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | RefSeq:NP_569019.1 |
| PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 |
| PANTHER:PTHR31062:SF48 | UniProt:Q0WUU2 | UniProt:Q8LF99 | SUPFAM:SSF49899 | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI00000A092C | InterPro:XET_C | InterPro:XTH | Symbol:XTH6 | SEG:seg | : |
Description
XTH6Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q0WUU2]
Coordinates
chr5:+:26298728..26300529
Molecular Weight (calculated)
33693.8 Da
IEP (calculated)
7.134
GRAVY (calculated)
-0.408
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKIYSPSFP GTLCLCIFTL LTLMFIRVSA RPATFVEDFK AAWSESHIRQ MEDGKAIQLV LDQSTGCGFA SKRKYLFGRV SMKIKLIPGD SAGTVTAFYM
101: NSDTATVRDE LDFEFLGNRS GQPYSVQTNI FAHGKGDREQ RVNLWFDPSM DYHTYTILWS HKHIVFYVDD VPIREYKNNE AKNIAYPTSQ PMGVYSTLWE
201: ADDWATRGGL EKIDWSKAPF YAYYKDFDIE GCPVPGPTFC PSNPHNWWEG YAYQSLNAVE ARRYRWVRVN HMVYDYCTDR SRFPVPPPEC RA
101: NSDTATVRDE LDFEFLGNRS GQPYSVQTNI FAHGKGDREQ RVNLWFDPSM DYHTYTILWS HKHIVFYVDD VPIREYKNNE AKNIAYPTSQ PMGVYSTLWE
201: ADDWATRGGL EKIDWSKAPF YAYYKDFDIE GCPVPGPTFC PSNPHNWWEG YAYQSLNAVE ARRYRWVRVN HMVYDYCTDR SRFPVPPPEC RA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.