Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038819.1-P | Field mustard | cytosol, extracellular, nucleus | 68.2 | 87.03 |
| CDY49308 | Canola | extracellular | 86.56 | 84.08 |
| CDY13000 | Canola | endoplasmic reticulum, extracellular, nucleus | 85.25 | 79.51 |
| KRH19006 | Soybean | vacuole | 63.28 | 65.87 |
| AT4G30270.1 | Thale cress | extracellular | 58.03 | 65.8 |
| KRH02889 | Soybean | extracellular | 62.3 | 65.29 |
| Solyc07g006860.2.1 | Tomato | extracellular | 60.33 | 64.56 |
| PGSC0003DMT400048241 | Potato | extracellular | 60.33 | 64.56 |
| AT5G57560.1 | Thale cress | extracellular | 60.0 | 64.44 |
| GSMUA_Achr6P30850_001 | Banana | extracellular | 59.34 | 64.18 |
| GSMUA_Achr10P... | Banana | extracellular | 59.02 | 63.83 |
| AT5G57550.1 | Thale cress | extracellular | 58.36 | 62.68 |
| AT4G25810.1 | Thale cress | extracellular | 58.69 | 62.59 |
| GSMUA_Achr10P... | Banana | extracellular | 56.72 | 60.07 |
| Os06t0696600-01 | Rice | extracellular | 55.74 | 59.03 |
| EER90302 | Sorghum | extracellular | 55.41 | 58.68 |
| TraesCS7B01G327400.1 | Wheat | extracellular | 53.11 | 56.84 |
| TraesCS7A01G427100.1 | Wheat | extracellular | 52.79 | 56.49 |
| TraesCS7A01G427300.1 | Wheat | extracellular | 52.46 | 56.14 |
| HORVU7Hr1G098370.1 | Barley | extracellular | 52.46 | 56.14 |
| AT5G57530.1 | Thale cress | extracellular | 52.13 | 55.79 |
| TraesCS7D01G419400.1 | Wheat | vacuole | 52.46 | 55.75 |
| AT4G25820.1 | Thale cress | extracellular | 51.8 | 55.05 |
| AT5G57540.1 | Thale cress | extracellular | 51.15 | 54.93 |
| AT4G14130.1 | Thale cress | extracellular | 51.48 | 54.33 |
| AT3G23730.1 | Thale cress | extracellular, vacuole | 50.16 | 52.58 |
| AT4G28850.1 | Thale cress | extracellular | 45.57 | 47.6 |
| AT2G06850.1 | Thale cress | extracellular | 44.26 | 45.61 |
| AT4G37800.1 | Thale cress | extracellular, vacuole | 43.61 | 45.39 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 43.28 | 45.05 |
| AT5G65730.1 | Thale cress | extracellular | 41.64 | 43.49 |
| AT2G14620.1 | Thale cress | vacuole | 42.3 | 43.14 |
| Zm00001d014614_P001 | Maize | nucleus, plastid | 52.79 | 42.71 |
| Zm00001d014615_P002 | Maize | extracellular | 52.79 | 42.71 |
| AT4G03210.1 | Thale cress | extracellular | 40.33 | 42.41 |
| AT1G11545.1 | Thale cress | extracellular | 39.67 | 39.67 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:816395 | UniProt:A0A178VQ29 | ProteinID:AAD08949.1 | ProteinID:AEC06809.1 |
| ArrayExpress:AT2G18800 | EnsemblPlantsGene:AT2G18800 | RefSeq:AT2G18800 | TAIR:AT2G18800 | RefSeq:AT2G18800-TAIR-G | EnsemblPlants:AT2G18800.1 |
| TAIR:AT2G18800.1 | Symbol:ATXTH21 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0030312 | GO:GO:0042545 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | GO:GO:0080022 |
| InterPro:IPR000757 | RefSeq:NP_179470.1 | ProteinID:OAP07193.1 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 |
| PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0009047 | ScanProsite:PS01034 | PFscan:PS51762 |
| PANTHER:PTHR31062 | PANTHER:PTHR31062:SF101 | UniProt:Q9ZV40 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0000048537 | InterPro:XET_C | InterPro:XTH | SEG:seg | : | : |
Description
XTH21Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VQ29]
Coordinates
chr2:+:8144881..8146477
Molecular Weight (calculated)
34147.2 Da
IEP (calculated)
8.276
GRAVY (calculated)
-0.341
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSTLLVMS ISLFLGLSIL LVVHGKDFNQ DIDITWGDGR GNILNNGTLL NLGLDQSSGS GFQSKAEYLY GKVDMQIKLV PGNSAGTVTT FYLKSQGLTW
101: DEIDFEFLGN VSGDPYIVHT NVYTQGKGDR EQQFYLWFDP TAAFHNYSIL WNPSHIVFYI DGKPIREFKN LEVLGVAYPK NQPMRMYGSL WNADDWATRG
201: GLVKTNWSQG PFVASFMNYN SENACVWSIV NGTTTTSPCS PGDSTSSSSS STSEWFSQRG MDSSSKKVLR WVQRKFMVYN YCKDKKRFSN GLPVECTAKN
301: KNTKS
101: DEIDFEFLGN VSGDPYIVHT NVYTQGKGDR EQQFYLWFDP TAAFHNYSIL WNPSHIVFYI DGKPIREFKN LEVLGVAYPK NQPMRMYGSL WNADDWATRG
201: GLVKTNWSQG PFVASFMNYN SENACVWSIV NGTTTTSPCS PGDSTSSSSS STSEWFSQRG MDSSSKKVLR WVQRKFMVYN YCKDKKRFSN GLPVECTAKN
301: KNTKS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.