Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
26583031
|
msms PMID:
26583031
doi
Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400048241 | Potato | extracellular | 94.74 | 94.74 |
Solyc03g093080.2.1 | Tomato | extracellular | 70.88 | 70.63 |
Solyc03g093120.2.1 | Tomato | extracellular | 70.18 | 69.93 |
Solyc03g093130.2.1 | Tomato | extracellular | 69.82 | 69.34 |
Solyc03g093110.2.1 | Tomato | extracellular | 69.12 | 68.64 |
GSMUA_Achr10P... | Banana | extracellular | 65.96 | 66.67 |
Solyc12g098610.1.1 | Tomato | nucleus | 60.7 | 66.28 |
KRH02889 | Soybean | extracellular | 67.37 | 65.98 |
Solyc05g046290.2.1 | Tomato | extracellular | 66.67 | 65.97 |
GSMUA_Achr6P30850_001 | Banana | extracellular | 65.26 | 65.96 |
Solyc09g092520.2.1 | Tomato | nucleus | 63.16 | 65.22 |
KRH19006 | Soybean | vacuole | 67.02 | 65.19 |
GSMUA_Achr10P... | Banana | extracellular | 63.86 | 63.19 |
Solyc07g009380.2.1 | Tomato | extracellular, nucleus | 60.35 | 62.55 |
Solyc07g006870.2.1 | Tomato | extracellular, vacuole | 61.4 | 62.06 |
Bra038819.1-P | Field mustard | cytosol, extracellular, nucleus | 51.58 | 61.51 |
Solyc07g056000.2.1 | Tomato | extracellular, nucleus | 61.05 | 60.63 |
HORVU7Hr1G098370.1 | Barley | extracellular | 60.35 | 60.35 |
AT2G18800.1 | Thale cress | extracellular | 64.56 | 60.33 |
TraesCS7B01G327400.1 | Wheat | extracellular | 60.0 | 60.0 |
Solyc12g017240.1.1 | Tomato | extracellular | 60.7 | 59.86 |
TraesCS7A01G427100.1 | Wheat | extracellular | 59.65 | 59.65 |
TraesCS7A01G427300.1 | Wheat | extracellular | 59.3 | 59.3 |
TraesCS7D01G419400.1 | Wheat | vacuole | 59.65 | 59.23 |
CDY49308 | Canola | extracellular | 64.91 | 58.92 |
Os06t0696600-01 | Rice | extracellular | 59.3 | 58.68 |
EER90302 | Sorghum | extracellular | 58.25 | 57.64 |
Solyc07g055990.2.1 | Tomato | nucleus | 58.6 | 57.59 |
CDY13000 | Canola | endoplasmic reticulum, extracellular, nucleus | 62.81 | 54.74 |
Solyc12g011030.1.1 | Tomato | nucleus | 51.58 | 53.07 |
Solyc12g007270.1.1 | Tomato | extracellular | 52.98 | 51.54 |
Solyc12g007260.1.1 | Tomato | extracellular | 52.63 | 51.37 |
Solyc12g007250.1.1 | Tomato | extracellular | 52.28 | 51.2 |
Solyc07g006850.1.1 | Tomato | golgi | 58.25 | 48.54 |
Solyc11g065600.1.1 | Tomato | nucleus | 48.42 | 47.1 |
Solyc03g098430.2.1 | Tomato | extracellular | 46.67 | 47.0 |
Solyc02g091920.2.1 | Tomato | nucleus | 47.72 | 46.1 |
Solyc11g040140.1.1 | Tomato | extracellular | 48.42 | 46.0 |
Solyc01g099630.2.1 | Tomato | extracellular | 46.67 | 44.93 |
Solyc07g052980.2.1 | Tomato | extracellular | 45.96 | 44.26 |
Solyc03g031800.2.1 | Tomato | extracellular | 44.21 | 42.71 |
Zm00001d014614_P001 | Maize | nucleus, plastid | 55.79 | 42.18 |
Zm00001d014615_P002 | Maize | extracellular | 55.79 | 42.18 |
Solyc10g005350.2.1 | Tomato | extracellular | 42.46 | 42.01 |
Solyc02g080160.2.1 | Tomato | extracellular | 43.51 | 41.61 |
Solyc01g106650.2.1 | Tomato | extracellular, vacuole | 42.11 | 40.96 |
Protein Annotations
Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
GO:GO:0005975 | GO:GO:0006073 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 |
GO:GO:0030312 | GO:GO:0042545 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | GO:GO:0080022 |
InterPro:IPR000757 | UniProt:K4CBF7 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 |
PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF101 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc07g006860.2 |
EnsemblPlants:Solyc07g006860.2.1 | UniParc:UPI000276C9BB | InterPro:XET_C | InterPro:XTH | SEG:seg | : |
Description
Probable xyloglucan endotransglucosylase/hydrolase protein 21 [Source:Projected from Arabidopsis thaliana (AT2G18800) UniProtKB/Swiss-Prot;Acc:Q9ZV40]
Coordinates
chr7:+:1717942..1719773
Molecular Weight (calculated)
32573.3 Da
IEP (calculated)
7.804
GRAVY (calculated)
-0.362
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLVLCLVI LAFCSLHYSL ASNNFNQDFD VTWGDGRAKV LNNGKLLTLS LDKVSGSGVK SKKEYLFGRI DMQLKLVRGN SAGTVTTYYL SSQGSTHDEI
101: DFEFLGNLSG DPYIVHTNVY TQGKGDKEQQ FYLWFDPTAD FHTYSILWNP QTIIFYVDGT PIRVFKNMES SGVPYPNKQP MRVYASLWNA DDWATRGGLV
201: KTNWSNAPFI AYFRNFKDNN ACIWEFGKSS CTNSTKSWFY HELDSTSQAR LQWVQKNYMV YNYCNDINRF PRGLPLECAF NSTTN
101: DFEFLGNLSG DPYIVHTNVY TQGKGDKEQQ FYLWFDPTAD FHTYSILWNP QTIIFYVDGT PIRVFKNMES SGVPYPNKQP MRVYASLWNA DDWATRGGLV
201: KTNWSNAPFI AYFRNFKDNN ACIWEFGKSS CTNSTKSWFY HELDSTSQAR LQWVQKNYMV YNYCNDINRF PRGLPLECAF NSTTN
001: MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA
Arabidopsis Description
XTH22Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQX4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.