Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37378 | Soybean | nucleus | 67.27 | 69.55 |
| Solyc05g046290.2.1 | Tomato | extracellular | 71.64 | 68.4 |
| Solyc03g093080.2.1 | Tomato | extracellular | 69.09 | 66.43 |
| Solyc03g093120.2.1 | Tomato | extracellular | 68.36 | 65.73 |
| Solyc12g098610.1.1 | Tomato | nucleus | 62.18 | 65.52 |
| Solyc03g093130.2.1 | Tomato | extracellular | 68.36 | 65.51 |
| KRH19136 | Soybean | nucleus | 66.91 | 65.02 |
| Solyc03g093110.2.1 | Tomato | extracellular | 67.64 | 64.81 |
| AT4G30270.1 | Thale cress | extracellular | 62.55 | 63.94 |
| Solyc09g092520.2.1 | Tomato | nucleus | 63.64 | 63.41 |
| CDY39193 | Canola | extracellular | 62.18 | 62.87 |
| Bra013922.1-P | Field mustard | extracellular | 65.45 | 62.72 |
| Bra008806.1-P | Field mustard | extracellular | 65.45 | 62.72 |
| CDX89393 | Canola | extracellular | 65.45 | 62.72 |
| AT4G25810.1 | Thale cress | extracellular | 65.09 | 62.59 |
| Bra002719.1-P | Field mustard | extracellular | 64.36 | 62.54 |
| CDY14905 | Canola | extracellular | 61.45 | 62.36 |
| VIT_11s0052g01250.t01 | Wine grape | extracellular | 65.45 | 62.28 |
| CDX94413 | Canola | extracellular | 64.73 | 62.02 |
| CDY66832 | Canola | extracellular | 61.09 | 61.99 |
| Bra024089.1-P | Field mustard | extracellular | 62.55 | 61.65 |
| Solyc07g006870.2.1 | Tomato | extracellular, vacuole | 62.91 | 61.35 |
| CDY59999 | Canola | extracellular | 54.91 | 61.13 |
| CDY28174 | Canola | extracellular | 62.55 | 60.99 |
| Bra011179.1-P | Field mustard | extracellular | 62.55 | 60.99 |
| CDX68640 | Canola | extracellular | 62.55 | 60.99 |
| CDX72228 | Canola | extracellular | 61.82 | 60.93 |
| CDY25903 | Canola | extracellular | 57.09 | 60.38 |
| Solyc07g006860.2.1 | Tomato | extracellular | 62.55 | 60.35 |
| AT5G57560.1 | Thale cress | extracellular | 61.82 | 59.86 |
| CDY67487 | Canola | extracellular | 56.36 | 59.62 |
| Bra020433.1-P | Field mustard | extracellular | 56.36 | 59.62 |
| CDX72227 | Canola | extracellular | 58.55 | 59.41 |
| KRH12375 | Soybean | extracellular | 66.18 | 57.59 |
| Solyc07g055990.2.1 | Tomato | nucleus | 57.82 | 54.83 |
| Solyc07g056000.2.1 | Tomato | extracellular, nucleus | 56.73 | 54.36 |
| CDY03539 | Canola | endoplasmic reticulum, extracellular | 61.09 | 53.85 |
| Solyc12g017240.1.1 | Tomato | extracellular | 55.27 | 52.6 |
| Solyc12g011030.1.1 | Tomato | nucleus | 52.0 | 51.62 |
| CDY02741 | Canola | extracellular | 54.55 | 51.02 |
| Solyc12g007270.1.1 | Tomato | extracellular | 52.36 | 49.15 |
| Solyc07g006850.1.1 | Tomato | golgi | 60.73 | 48.83 |
| Solyc12g007260.1.1 | Tomato | extracellular | 49.45 | 46.58 |
| Solyc12g007250.1.1 | Tomato | extracellular | 48.0 | 45.36 |
| Solyc02g091920.2.1 | Tomato | nucleus | 48.0 | 44.75 |
| Solyc11g065600.1.1 | Tomato | nucleus | 47.27 | 44.37 |
| Solyc03g098430.2.1 | Tomato | extracellular | 45.09 | 43.82 |
| Solyc07g052980.2.1 | Tomato | extracellular | 46.91 | 43.58 |
| Solyc11g040140.1.1 | Tomato | extracellular | 47.27 | 43.33 |
| Solyc03g031800.2.1 | Tomato | extracellular | 45.82 | 42.71 |
| Solyc01g099630.2.1 | Tomato | extracellular | 45.82 | 42.57 |
| Solyc10g005350.2.1 | Tomato | extracellular | 43.64 | 41.67 |
| Solyc01g106650.2.1 | Tomato | extracellular, vacuole | 43.64 | 40.96 |
| Solyc02g080160.2.1 | Tomato | extracellular | 44.0 | 40.6 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EMBL:AF176776 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | PFAM:PF00722 |
| PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF101 |
| UniProt:Q9FZ05 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc07g009380.2 | EnsemblPlants:Solyc07g009380.2.1 | TMHMM:TMhelix |
| UniParc:UPI000009E06D | InterPro:XET_C | InterPro:XTH | SEG:seg | : | : |
Description
Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q9FZ05]
Coordinates
chr7:+:4435429..4437750
Molecular Weight (calculated)
31588.4 Da
IEP (calculated)
8.546
GRAVY (calculated)
-0.349
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKTSSCIFT FFLLICFFVV VAFGGTFDQE FDVTWGYGRV KILENGQLLT LSLDRSSGSG FKSKQQYMFA KIDMKIKLVP GNSAGTATTY YLSSVGSAHD
101: EIDFEFLGNV SGEPYTLHTN VYAQGKGDRE QQFHLWFDPT KDFHTYSILW NPRNIIFLVD GTPIRQYKNL EATNGIPYPK NQPMWLYSSL WNAEEWATRG
201: GLVRTDWSKA PFIASYRNFN AQTSKNPTAN SWLTQSLDNV GLTRMKWVQK NYMIYNYCTD TKRFPQGFPH ECTLN
101: EIDFEFLGNV SGEPYTLHTN VYAQGKGDRE QQFHLWFDPT KDFHTYSILW NPRNIIFLVD GTPIRQYKNL EATNGIPYPK NQPMWLYSSL WNAEEWATRG
201: GLVRTDWSKA PFIASYRNFN AQTSKNPTAN SWLTQSLDNV GLTRMKWVQK NYMIYNYCTD TKRFPQGFPH ECTLN
001: MACFATKQPL LLSLLLAIGF FVVAASAGNF YESFDITWGN GRANIFENGQ LLTCTLDKVS GSGFQSKKEY LFGKIDMKLK LVAGNSAGTV TAYYLSSKGT
101: AWDEIDFEFL GNRTGHPYTI HTNVFTGGKG DREMQFRLWF DPTADFHTYT VHWNPVNIIF LVDGIPIRVF KNNEKNGVAY PKNQPMRIYS SLWEADDWAT
201: EGGRVKIDWS NAPFKASYRN FNDQSSCSRT SSSKWVTCEP NSNSWMWTTL NPAQYGKMMW VQRDFMIYNY CTDFKRFPQG LPKECKL
101: AWDEIDFEFL GNRTGHPYTI HTNVFTGGKG DREMQFRLWF DPTADFHTYT VHWNPVNIIF LVDGIPIRVF KNNEKNGVAY PKNQPMRIYS SLWEADDWAT
201: EGGRVKIDWS NAPFKASYRN FNDQSSCSRT SSSKWVTCEP NSNSWMWTTL NPAQYGKMMW VQRDFMIYNY CTDFKRFPQG LPKECKL
Arabidopsis Description
XTH14Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UTG4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.