Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005949 | Potato | cytosol | 64.36 | 95.88 |
| Solyc07g056000.2.1 | Tomato | extracellular, nucleus | 91.7 | 92.33 |
| Solyc07g055990.2.1 | Tomato | nucleus | 67.82 | 67.59 |
| Solyc12g011030.1.1 | Tomato | nucleus | 62.98 | 65.7 |
| Solyc12g098610.1.1 | Tomato | nucleus | 58.48 | 64.75 |
| Solyc09g092520.2.1 | Tomato | nucleus | 60.9 | 63.77 |
| Solyc07g006860.2.1 | Tomato | extracellular | 59.86 | 60.7 |
| Solyc03g093080.2.1 | Tomato | extracellular | 59.86 | 60.49 |
| Solyc03g093130.2.1 | Tomato | extracellular | 59.52 | 59.93 |
| Solyc03g093120.2.1 | Tomato | extracellular | 59.17 | 59.79 |
| Solyc03g093110.2.1 | Tomato | extracellular | 58.82 | 59.23 |
| Solyc07g006870.2.1 | Tomato | extracellular, vacuole | 56.4 | 57.8 |
| Solyc05g046290.2.1 | Tomato | extracellular | 56.06 | 56.25 |
| Solyc07g009380.2.1 | Tomato | extracellular, nucleus | 52.6 | 55.27 |
| KRH73676 | Soybean | extracellular | 52.25 | 53.36 |
| KRH14468 | Soybean | extracellular | 51.21 | 51.39 |
| Solyc07g006850.1.1 | Tomato | golgi | 58.82 | 49.71 |
| KRG98913 | Soybean | vacuole | 49.13 | 49.31 |
| Solyc12g007260.1.1 | Tomato | extracellular | 47.75 | 47.26 |
| Solyc12g007250.1.1 | Tomato | extracellular | 47.4 | 47.08 |
| Solyc11g065600.1.1 | Tomato | nucleus | 47.06 | 46.42 |
| Solyc11g040140.1.1 | Tomato | extracellular | 47.75 | 46.0 |
| Solyc03g098430.2.1 | Tomato | extracellular | 44.98 | 45.94 |
| Solyc12g007270.1.1 | Tomato | extracellular | 46.37 | 45.73 |
| Solyc07g052980.2.1 | Tomato | extracellular | 46.02 | 44.93 |
| Solyc01g099630.2.1 | Tomato | extracellular | 46.02 | 44.93 |
| Solyc02g091920.2.1 | Tomato | nucleus | 45.33 | 44.41 |
| Solyc01g106650.2.1 | Tomato | extracellular, vacuole | 41.18 | 40.61 |
| Solyc10g005350.2.1 | Tomato | extracellular | 40.14 | 40.28 |
| Solyc02g080160.2.1 | Tomato | extracellular | 39.79 | 38.59 |
| Solyc03g031800.2.1 | Tomato | extracellular | 39.1 | 38.31 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | UniProt:K4DD58 |
| PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | PRINTS:PR00737 | ScanProsite:PS01034 | PFscan:PS51762 |
| PANTHER:PTHR31062 | PANTHER:PTHR31062:SF62 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc12g017240.1 | EnsemblPlants:Solyc12g017240.1.1 |
| UniParc:UPI000276AB14 | InterPro:XET_C | InterPro:XTH | SEG:seg | : | : |
Description
Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:K4DD58]
Coordinates
chr12:-:6426369..6427448
Molecular Weight (calculated)
32702.2 Da
IEP (calculated)
8.445
GRAVY (calculated)
-0.442
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLQQLSVLA LLLLLCPVWA DNFYQDATVT FGDQRAQIQD GGRLLALSLD KISGSGFQSK NEYLFGRFDM QLKLVPGNSA GTVTTFYLSS QGAGHDEIDF
101: EFLGNSSGQP YTVHTNVYSQ GKGNKEQQFR LWFDPTSSFH TYSIVWNSQR IIFLVDNIPI RVFNNHEKLG VAFPKNQAMR VYASLWNADD WATQGGRVKT
201: DWSMAPFTAS YRNFNTNACV WSAASSTSSC GGSKTDSVNN DQAWQTQELN GNDRNRLRWV QQKYMIYNYC ADAKRFSQGL SPECKRSRF
101: EFLGNSSGQP YTVHTNVYSQ GKGNKEQQFR LWFDPTSSFH TYSIVWNSQR IIFLVDNIPI RVFNNHEKLG VAFPKNQAMR VYASLWNADD WATQGGRVKT
201: DWSMAPFTAS YRNFNTNACV WSAASSTSSC GGSKTDSVNN DQAWQTQELN GNDRNRLRWV QQKYMIYNYC ADAKRFSQGL SPECKRSRF
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.