Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014975.1-P | Field mustard | extracellular, vacuole | 94.16 | 94.16 |
| CDY61576 | Canola | vacuole | 89.69 | 93.21 |
| AT4G14130.1 | Thale cress | extracellular | 84.88 | 85.47 |
| VIT_05s0062g00610.t01 | Wine grape | cytosol | 69.42 | 76.23 |
| VIT_05s0062g00480.t01 | Wine grape | cytosol | 68.73 | 75.47 |
| Solyc12g098610.1.1 | Tomato | nucleus | 66.32 | 73.95 |
| KRH42721 | Soybean | extracellular, nucleus | 71.82 | 73.85 |
| KRG97361 | Soybean | nucleus | 70.79 | 73.84 |
| KRH58823 | Soybean | extracellular, nucleus | 71.48 | 73.5 |
| KRH31558 | Soybean | nucleus | 69.42 | 73.19 |
| VIT_05s0062g00250.t01 | Wine grape | extracellular | 69.42 | 72.4 |
| VIT_05s0062g00240.t01 | Wine grape | extracellular | 69.76 | 72.24 |
| PGSC0003DMT400056316 | Potato | extracellular | 68.38 | 72.1 |
| Solyc09g092520.2.1 | Tomato | nucleus | 68.04 | 71.74 |
| PGSC0003DMT400011902 | Potato | extracellular | 65.98 | 68.82 |
| AT4G25810.1 | Thale cress | extracellular | 60.14 | 61.19 |
| AT4G30270.1 | Thale cress | extracellular | 55.67 | 60.22 |
| AT5G57550.1 | Thale cress | extracellular | 58.76 | 60.21 |
| AT5G57560.1 | Thale cress | extracellular | 57.04 | 58.45 |
| AT5G57530.1 | Thale cress | extracellular | 56.7 | 57.89 |
| AT5G57540.1 | Thale cress | extracellular | 56.36 | 57.75 |
| AT4G25820.1 | Thale cress | extracellular | 56.7 | 57.49 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 50.86 | 50.51 |
| AT2G18800.1 | Thale cress | extracellular | 52.58 | 50.16 |
| AT2G06850.1 | Thale cress | extracellular | 49.14 | 48.31 |
| AT5G65730.1 | Thale cress | extracellular | 46.74 | 46.58 |
| AT4G28850.1 | Thale cress | extracellular | 46.39 | 46.23 |
| AT4G03210.1 | Thale cress | extracellular | 45.7 | 45.86 |
| AT4G37800.1 | Thale cress | extracellular, vacuole | 45.02 | 44.71 |
| AT1G11545.1 | Thale cress | extracellular | 44.33 | 42.3 |
| AT2G14620.1 | Thale cress | vacuole | 42.61 | 41.47 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:821955 | UniProt:A0A178V9G6 | ProteinID:AEE76807.1 | EMBL:AK175804 |
| EMBL:AK175805 | ArrayExpress:AT3G23730 | EnsemblPlantsGene:AT3G23730 | RefSeq:AT3G23730 | TAIR:AT3G23730 | RefSeq:AT3G23730-TAIR-G |
| EnsemblPlants:AT3G23730.1 | TAIR:AT3G23730.1 | EMBL:AY084449 | ProteinID:BAB01849.1 | InterPro:ConA-like_dom_sf | InterPro:GH16 |
| InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 |
| RefSeq:NP_566738.1 | ProteinID:OAP02318.1 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01034 |
| PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF62 | UniProt:Q680R2 | UniProt:Q8LG58 | SUPFAM:SSF49899 |
| SignalP:SignalP-noTM | UniParc:UPI00000A6EE0 | InterPro:XET_C | InterPro:XTH | Symbol:XTH16 | : |
Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
Coordinates
chr3:+:8550037..8551403
Molecular Weight (calculated)
33148.4 Da
IEP (calculated)
9.620
GRAVY (calculated)
-0.384
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.