Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G104700.1 | Wheat | extracellular | 93.31 | 92.98 |
| TraesCS2D01G086800.1 | Wheat | extracellular | 91.9 | 92.23 |
| HORVU2Hr1G014530.3 | Barley | extracellular | 91.9 | 83.65 |
| EES04926 | Sorghum | extracellular, vacuole | 75.0 | 72.2 |
| Zm00001d015977_P001 | Maize | mitochondrion | 75.35 | 71.1 |
| TraesCS2A01G498400.1 | Wheat | vacuole | 63.03 | 61.94 |
| TraesCS2A01G498300.1 | Wheat | vacuole | 63.03 | 61.94 |
| TraesCS2A01G498200.1 | Wheat | extracellular | 63.03 | 61.94 |
| TraesCS7A01G331200.1 | Wheat | vacuole | 61.27 | 61.05 |
| TraesCS2A01G498500.1 | Wheat | vacuole | 62.68 | 60.96 |
| GSMUA_Achr8P19740_001 | Banana | extracellular | 45.77 | 48.33 |
| GSMUA_Achr3P03390_001 | Banana | extracellular | 49.65 | 47.96 |
| GSMUA_Achr7P10940_001 | Banana | extracellular | 46.13 | 47.12 |
| TraesCS7A01G427300.1 | Wheat | extracellular | 46.83 | 46.67 |
| TraesCS7A01G427100.1 | Wheat | extracellular | 46.48 | 46.32 |
| TraesCS7A01G426900.1 | Wheat | extracellular | 46.48 | 46.15 |
| TraesCS7A01G427600.1 | Wheat | extracellular | 46.83 | 46.02 |
| TraesCS7A01G426700.1 | Wheat | extracellular | 46.48 | 45.67 |
| TraesCS7A01G427000.1 | Wheat | extracellular | 45.77 | 45.45 |
| TraesCS7A01G426100.1 | Wheat | vacuole | 45.42 | 44.64 |
| AT4G28850.1 | Thale cress | extracellular | 45.77 | 44.52 |
| TraesCS7A01G426600.1 | Wheat | vacuole | 45.42 | 44.48 |
| VIT_11s0016g03480.t01 | Wine grape | extracellular | 44.72 | 43.64 |
| CDY35228 | Canola | extracellular | 44.72 | 43.49 |
| KRH41530 | Soybean | nucleus | 42.96 | 43.11 |
| Bra011066.1-P | Field mustard | extracellular | 44.01 | 42.81 |
| CDY06861 | Canola | extracellular | 44.01 | 42.81 |
| Solyc12g007260.1.1 | Tomato | extracellular | 44.01 | 42.81 |
| Solyc12g007270.1.1 | Tomato | extracellular | 44.01 | 42.66 |
| KRH39331 | Soybean | nucleus | 42.25 | 41.52 |
| KRH76320 | Soybean | nucleus | 42.25 | 41.52 |
| Solyc12g007250.1.1 | Tomato | extracellular | 42.25 | 41.24 |
| TraesCS2A01G433700.1 | Wheat | vacuole | 42.61 | 40.88 |
| TraesCS2A01G433800.1 | Wheat | endoplasmic reticulum, extracellular | 40.14 | 40.71 |
| TraesCS2A01G433600.1 | Wheat | vacuole | 41.9 | 40.2 |
| TraesCS7A01G427200.1 | Wheat | extracellular, vacuole | 41.2 | 39.66 |
| TraesCS4A01G172600.1 | Wheat | unclear | 39.79 | 38.44 |
| TraesCS2A01G047200.1 | Wheat | vacuole | 38.73 | 37.93 |
| TraesCS2A01G047100.1 | Wheat | endoplasmic reticulum, extracellular | 38.38 | 37.46 |
| TraesCS6A01G337600.1 | Wheat | extracellular | 38.73 | 37.29 |
| TraesCS2A01G434300.1 | Wheat | extracellular | 39.44 | 36.96 |
| TraesCS7A01G463800.1 | Wheat | extracellular | 36.97 | 36.84 |
| TraesCS2A01G433500.1 | Wheat | mitochondrion | 38.38 | 32.54 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 |
| InterPro:IPR000757 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 |
| PANTHER:PTHR31062 | PANTHER:PTHR31062:SF95 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS2A01G089000 | EnsemblPlants:TraesCS2A01G089000.1 |
| InterPro:XET_C | InterPro:XTH | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:-:42225836..42227162
Molecular Weight (calculated)
31231.4 Da
IEP (calculated)
4.469
GRAVY (calculated)
-0.245
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKPEALAAV LVALASVLGL VSGGNFLEEC DATWEPQNCW TYDGGNSLSL ALVSNSSGSM IRSKRQFIYG TVSTMIQLVK GDSAGTVTTY YTSSVGDDHD
101: EIDFEFLGNE TGQPYTLHTN VYAAGVGGKE MQFRPWFDPT DGYHNYTISW TPCMLVWYVD GTPIRAFRNY EHAHGVAFPT SRPMYAYSSI WAAEDWATQG
201: GRVRADWSRA PFVASYRGID LDVCECYGGD CVYTCAGAFG ACGGLTGDQR GKMRWVQDNY RIYDYCADQE AGKVPGVECT LPQY
101: EIDFEFLGNE TGQPYTLHTN VYAAGVGGKE MQFRPWFDPT DGYHNYTISW TPCMLVWYVD GTPIRAFRNY EHAHGVAFPT SRPMYAYSSI WAAEDWATQG
201: GRVRADWSRA PFVASYRGID LDVCECYGGD CVYTCAGAFG ACGGLTGDQR GKMRWVQDNY RIYDYCADQE AGKVPGVECT LPQY
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.