Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G045100.1 | Wheat | cytosol | 72.16 | 98.59 |
| TraesCS2A01G047200.1 | Wheat | vacuole | 96.56 | 96.9 |
| TraesCS2B01G059000.1 | Wheat | vacuole | 92.78 | 92.78 |
| EES13579 | Sorghum | vacuole | 70.45 | 70.45 |
| Os08t0240566-00 | Rice | cytosol, extracellular, mitochondrion, plastid | 76.29 | 69.59 |
| Zm00001d024392_P001 | Maize | mitochondrion | 71.48 | 66.03 |
| TraesCS7A01G463800.1 | Wheat | extracellular | 59.45 | 60.7 |
| TraesCS2A01G434300.1 | Wheat | extracellular | 56.7 | 54.46 |
| TraesCS2A01G433700.1 | Wheat | vacuole | 49.48 | 48.65 |
| TraesCS2A01G433800.1 | Wheat | endoplasmic reticulum, extracellular | 45.36 | 47.14 |
| TraesCS7A01G426100.1 | Wheat | vacuole | 46.74 | 47.06 |
| TraesCS7A01G427000.1 | Wheat | extracellular | 46.05 | 46.85 |
| TraesCS7A01G427200.1 | Wheat | extracellular, vacuole | 47.42 | 46.78 |
| TraesCS2A01G433600.1 | Wheat | vacuole | 47.42 | 46.62 |
| TraesCS7A01G426900.1 | Wheat | extracellular | 45.7 | 46.5 |
| TraesCS7A01G426600.1 | Wheat | vacuole | 46.05 | 46.21 |
| TraesCS7A01G426700.1 | Wheat | extracellular | 45.7 | 46.02 |
| TraesCS7A01G427600.1 | Wheat | extracellular | 45.7 | 46.02 |
| TraesCS6A01G337600.1 | Wheat | extracellular | 46.39 | 45.76 |
| TraesCS7A01G427100.1 | Wheat | extracellular | 44.33 | 45.26 |
| TraesCS7A01G427300.1 | Wheat | extracellular | 43.99 | 44.91 |
| TraesCS2A01G498400.1 | Wheat | vacuole | 39.86 | 40.14 |
| TraesCS2A01G498300.1 | Wheat | vacuole | 39.86 | 40.14 |
| TraesCS2A01G498200.1 | Wheat | extracellular | 39.52 | 39.79 |
| TraesCS7A01G331200.1 | Wheat | vacuole | 38.83 | 39.65 |
| TraesCS4A01G172600.1 | Wheat | unclear | 39.52 | 39.12 |
| TraesCS2A01G089000.1 | Wheat | extracellular | 37.46 | 38.38 |
| TraesCS2A01G498500.1 | Wheat | vacuole | 38.49 | 38.36 |
| TraesCS2A01G433500.1 | Wheat | mitochondrion | 39.52 | 34.33 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0030312 | GO:GO:0042546 |
| GO:GO:0048046 | InterPro:IPR000757 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | PRINTS:PR00737 |
| ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF46 | SUPFAM:SSF49899 | SignalP:SignalP-noTM |
| EnsemblPlantsGene:TraesCS2A01G047100 | EnsemblPlants:TraesCS2A01G047100.1 | InterPro:XET_C | InterPro:XTH | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:+:18347059..18348314
Molecular Weight (calculated)
33559.4 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.567
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRLARRARL LASLVEAFYI ILAVSPVASD MTDSLDLLWG NTQVEYDSSG RQTVSLSLDR WTTSAFRSKS MHLFGRFDMD IKLVPRDSAG TITTLYMLTE
101: GPWEEHDEVD LEFLGNSSGE PYTLHTNIYA RGRGGREKQY RLWFDPTQDF HTYSILWNPK EILIIVDGTP VRQMKNQQRK DIPFPLYQPM RLYSSIWNAE
201: DWATQGGRVK TDWSQAPFTS LFRNYSAVSC VSQKTAWICG RGSSDSSWFT HVLDEEGQRK LKEVDEKHKI YDYCVDSRRY PNGYPPECGS Q
101: GPWEEHDEVD LEFLGNSSGE PYTLHTNIYA RGRGGREKQY RLWFDPTQDF HTYSILWNPK EILIIVDGTP VRQMKNQQRK DIPFPLYQPM RLYSSIWNAE
201: DWATQGGRVK TDWSQAPFTS LFRNYSAVSC VSQKTAWICG RGSSDSSWFT HVLDEEGQRK LKEVDEKHKI YDYCVDSRRY PNGYPPECGS Q
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.