Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75596 | Sorghum | cytosol, extracellular, plastid | 55.1 | 100.0 |
| Zm00001d046007_P001 | Maize | extracellular | 90.82 | 90.51 |
| TraesCS7A01G331200.1 | Wheat | vacuole | 69.05 | 71.23 |
| TraesCS7D01G339400.1 | Wheat | extracellular | 68.37 | 69.55 |
| TraesCS7B01G242900.1 | Wheat | extracellular, vacuole | 67.35 | 68.51 |
| HORVU7Hr1G081740.1 | Barley | extracellular, vacuole | 70.07 | 63.38 |
| EES04929 | Sorghum | extracellular, vacuole | 61.22 | 62.07 |
| EES04926 | Sorghum | extracellular, vacuole | 57.48 | 57.29 |
| GSMUA_Achr8P19740_001 | Banana | extracellular | 46.94 | 51.3 |
| GSMUA_Achr7P10940_001 | Banana | extracellular | 47.62 | 50.36 |
| GSMUA_Achr3P03390_001 | Banana | extracellular | 49.66 | 49.66 |
| KRH39331 | Soybean | nucleus | 48.3 | 49.13 |
| AT4G28850.1 | Thale cress | extracellular | 48.64 | 48.97 |
| KRH76320 | Soybean | nucleus | 47.28 | 48.1 |
| CDY06861 | Canola | extracellular | 47.62 | 47.95 |
| CDY35228 | Canola | extracellular | 47.62 | 47.95 |
| VIT_11s0016g03480.t01 | Wine grape | extracellular | 47.28 | 47.77 |
| Bra011066.1-P | Field mustard | extracellular | 47.28 | 47.6 |
| Solyc12g007270.1.1 | Tomato | extracellular | 46.6 | 46.76 |
| EER90302 | Sorghum | extracellular | 45.58 | 46.53 |
| KRH41530 | Soybean | nucleus | 44.56 | 46.29 |
| Solyc12g007260.1.1 | Tomato | extracellular | 45.58 | 45.89 |
| EER90303 | Sorghum | extracellular, golgi, vacuole | 46.94 | 45.85 |
| EER88885 | Sorghum | extracellular | 44.9 | 45.21 |
| Solyc12g007250.1.1 | Tomato | extracellular | 43.88 | 44.33 |
| EES12802 | Sorghum | endoplasmic reticulum, extracellular | 41.5 | 42.96 |
| EES12801 | Sorghum | extracellular | 41.84 | 40.59 |
| EER88886 | Sorghum | golgi | 43.2 | 40.32 |
| EES11382 | Sorghum | extracellular, vacuole | 40.48 | 39.93 |
| OQU83588 | Sorghum | extracellular | 40.82 | 39.6 |
| EES13578 | Sorghum | extracellular | 38.44 | 39.37 |
| KXG24787 | Sorghum | vacuole | 38.1 | 38.23 |
| EES13579 | Sorghum | vacuole | 37.76 | 38.14 |
| EES13577 | Sorghum | extracellular | 36.73 | 37.76 |
| KXG36371 | Sorghum | extracellular | 38.78 | 35.74 |
| EER91282 | Sorghum | extracellular, vacuole | 38.78 | 35.4 |
| EES11493 | Sorghum | extracellular, vacuole | 38.78 | 35.08 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:8073047 | UniProt:C5Z350 | InterPro:ConA-like_dom_sf | EnsemblPlants:EER89799 |
| ProteinID:EER89799 | ProteinID:EER89799.1 | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 |
| GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 |
| GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 |
| GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 |
| ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF49 | EnsemblPlantsGene:SORBI_3010G146300 | SUPFAM:SSF49899 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001A89700 | InterPro:XET_C | RefSeq:XP_002438432.1 | InterPro:XTH |
Description
hypothetical protein
Coordinates
chr10:-:41443475..41445067
Molecular Weight (calculated)
33013.9 Da
IEP (calculated)
5.360
GRAVY (calculated)
-0.257
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSAKILRL AAVTLMAVLE LSLVGANFLG DCDITWEPQN AEMDEGGNHL TLSLVSNSSG SMLRTKKQFI FGSVSTRIKL VKGNSAGTVT TYYTSSIGDN
101: HDEIDFEFLG NETGKPYTVH TNVFADGIGQ KEMQFRPWFD PTADYHNYTI FWNQCMIVWF IDDIPIRVFR NYSAQGVPFP TRRQMYAFSS IWAAEDWATQ
201: GGRVKTDWTK APFVAEYRDI NLRVCDCASY GAAGCPDSCA SSSNWYAAPD LCQLSEKQLK QMRAVQLGYT IYDYCADGKR YNGTVPLECS MRQY
101: HDEIDFEFLG NETGKPYTVH TNVFADGIGQ KEMQFRPWFD PTADYHNYTI FWNQCMIVWF IDDIPIRVFR NYSAQGVPFP TRRQMYAFSS IWAAEDWATQ
201: GGRVKTDWTK APFVAEYRDI NLRVCDCASY GAAGCPDSCA SSSNWYAAPD LCQLSEKQLK QMRAVQLGYT IYDYCADGKR YNGTVPLECS MRQY
001: MAGLQAKTLM FVLAAALATL GRTFVEADFS KNFIVTWGKD HMFMNGTNLR LVLDKSAGSA IKSKVAHLFG SVEMLIKLVP GNSAGTVAAY YLSSTGSTHD
101: EIDFEFLGNA TGQPYTIHTN LYAQGKGNRE QQFRPWFNPT NGFHNYTIHW NPSEVVWFVD GTPIRVFRNY ESEGIAYPNK QGMKVFASLW NAEDWATQGG
201: RVKTNWTLAP FVAEGRRYKA RACLWKGSVS IKQCVDPTIR SNWWTSPSFS QLTASQLTKM QKIRDGFMIY DYCKDTNRFK GVMPPECSKK QF
101: EIDFEFLGNA TGQPYTIHTN LYAQGKGNRE QQFRPWFNPT NGFHNYTIHW NPSEVVWFVD GTPIRVFRNY ESEGIAYPNK QGMKVFASLW NAEDWATQGG
201: RVKTNWTLAP FVAEGRRYKA RACLWKGSVS IKQCVDPTIR SNWWTSPSFS QLTASQLTKM QKIRDGFMIY DYCKDTNRFK GVMPPECSKK QF
Arabidopsis Description
XTH26Probable xyloglucan endotransglucosylase/hydrolase protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVV2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.