Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021667_P001 | Maize | plasma membrane | 90.91 | 87.88 |
| TraesCS2D01G224300.1 | Wheat | extracellular | 76.18 | 79.93 |
| TraesCS2B01G244500.1 | Wheat | extracellular | 75.86 | 79.08 |
| GSMUA_Achr1P08500_001 | Banana | extracellular | 57.68 | 67.9 |
| HORVU2Hr1G045330.4 | Barley | extracellular, vacuole | 77.12 | 66.31 |
| Solyc10g005350.2.1 | Tomato | extracellular | 57.68 | 63.89 |
| VIT_10s0116g00520.t01 | Wine grape | extracellular, vacuole | 58.62 | 62.33 |
| KRG91233 | Soybean | extracellular | 58.62 | 62.13 |
| Solyc03g031800.2.1 | Tomato | extracellular | 57.05 | 61.69 |
| KRH35587 | Soybean | extracellular | 58.31 | 61.59 |
| Bra019846.1-P | Field mustard | extracellular | 57.68 | 61.54 |
| CDX97967 | Canola | extracellular | 57.68 | 61.54 |
| CDY49788 | Canola | extracellular | 57.68 | 61.54 |
| PGSC0003DMT400061841 | Potato | extracellular | 56.74 | 61.36 |
| AT1G11545.1 | Thale cress | extracellular | 57.37 | 60.0 |
| Solyc02g080160.2.1 | Tomato | extracellular | 53.29 | 57.05 |
| PGSC0003DMT400005342 | Potato | extracellular | 53.29 | 57.05 |
| OQU83588 | Sorghum | extracellular | 43.89 | 46.2 |
| EER90303 | Sorghum | extracellular, golgi, vacuole | 42.95 | 45.51 |
| EER88885 | Sorghum | extracellular | 41.07 | 44.86 |
| EER90302 | Sorghum | extracellular | 39.19 | 43.4 |
| EES12802 | Sorghum | endoplasmic reticulum, extracellular | 38.24 | 42.96 |
| OQU75596 | Sorghum | cytosol, extracellular, plastid | 21.63 | 42.59 |
| EER91282 | Sorghum | extracellular, vacuole | 41.69 | 41.3 |
| EES11493 | Sorghum | extracellular, vacuole | 41.69 | 40.92 |
| KXG24787 | Sorghum | vacuole | 37.3 | 40.61 |
| EER88886 | Sorghum | golgi | 38.87 | 39.37 |
| EES04929 | Sorghum | extracellular, vacuole | 35.74 | 39.31 |
| EES04926 | Sorghum | extracellular, vacuole | 36.05 | 38.98 |
| EER89799 | Sorghum | vacuole | 35.74 | 38.78 |
| EES13579 | Sorghum | vacuole | 35.11 | 38.49 |
| EES11382 | Sorghum | extracellular, vacuole | 34.8 | 37.25 |
| EES13577 | Sorghum | extracellular | 32.92 | 36.71 |
| EES13578 | Sorghum | extracellular | 32.92 | 36.59 |
| EES12801 | Sorghum | extracellular | 34.48 | 36.3 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | UniProt:A0A1B6QEM0 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf | InterPro:GH16 |
| InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 |
| EnsemblPlants:KXG36371 | ProteinID:KXG36371 | ProteinID:KXG36371.1 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 |
| PRINTS:PR00737 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF1 | EnsemblPlantsGene:SORBI_3002G324100 |
| SUPFAM:SSF49899 | SignalP:SignalP-noTM | UniParc:UPI00081AC693 | InterPro:XET_C | InterPro:XTH | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:+:69496072..69499548
Molecular Weight (calculated)
34805.7 Da
IEP (calculated)
5.129
GRAVY (calculated)
-0.192
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTGGPPRRP CAGALLLPLA AAVAVVLSSC CCHGASAAAS FGDNFEITGA EDHVKTSADG QTWYLYLDNK TGVGFQTKQR YLFGWFSMKL KLVGNDSAGV
101: VTAYYMCSDV DAAPLRDELD FEFLGNRSGE PYIIQTNVYH NGVGGREMRH SLWFDPTADF HTYAILWNPK HIVFFVDKVA IRVYPNDASK PGGGGGSGFF
201: PISKPMYIFS SIWNADDWAT RGGLEKTDWS RAPFVSSYRD FAADACAWPA AGGPPACAAA TGDSWWDQPP AWALDAGQRL DNAWVARNLL IYDYCDDRKR
301: FPTPPEECAL RDAAATTAS
101: VTAYYMCSDV DAAPLRDELD FEFLGNRSGE PYIIQTNVYH NGVGGREMRH SLWFDPTADF HTYAILWNPK HIVFFVDKVA IRVYPNDASK PGGGGGSGFF
201: PISKPMYIFS SIWNADDWAT RGGLEKTDWS RAPFVSSYRD FAADACAWPA AGGPPACAAA TGDSWWDQPP AWALDAGQRL DNAWVARNLL IYDYCDDRKR
301: FPTPPEECAL RDAAATTAS
001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA
Arabidopsis Description
XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.