Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90476 | Sorghum | cytosol | 93.32 | 97.76 |
| Os03t0858100-01 | Rice | cytosol, plasma membrane | 91.0 | 95.42 |
| TraesCS4A01G317800.1 | Wheat | cytosol, golgi | 88.41 | 92.8 |
| TraesCS5B01G561500.1 | Wheat | cytosol, golgi, unclear | 87.79 | 92.75 |
| TraesCS5D01G568300.3 | Wheat | cytosol | 86.1 | 92.18 |
| HORVU5Hr1G124770.13 | Barley | cytosol | 87.34 | 89.25 |
| VIT_06s0009g01690.t01 | Wine grape | cytosol | 4.28 | 88.89 |
| Zm00001d012815_P022 | Maize | cytosol | 88.24 | 86.01 |
| GSMUA_Achr8P33200_001 | Banana | cytosol | 82.17 | 85.77 |
| VIT_16s0039g02220.t01 | Wine grape | cytosol | 81.73 | 85.22 |
| KRH24046 | Soybean | cytosol, nucleus | 80.3 | 83.66 |
| GSMUA_Achr1P25620_001 | Banana | cytosol | 82.53 | 83.65 |
| KRH29017 | Soybean | cytosol, nucleus | 80.21 | 83.57 |
| Solyc03g096920.2.1 | Tomato | cytosol, nucleus, plastid | 80.04 | 83.53 |
| KRH27740 | Soybean | cytosol | 79.41 | 83.19 |
| KRH77701 | Soybean | cytosol | 78.88 | 82.63 |
| AT5G17020.1 | Thale cress | cytosol | 78.34 | 81.77 |
| CDY02737 | Canola | cytosol | 77.81 | 81.13 |
| CDX85477 | Canola | cytosol | 77.63 | 80.95 |
| CDX70730 | Canola | cytosol | 76.56 | 80.66 |
| CDX69407 | Canola | cytosol | 76.38 | 80.47 |
| CDX78722 | Canola | cytosol | 76.2 | 80.28 |
| CDY16965 | Canola | cytosol | 76.92 | 80.2 |
| CDY69253 | Canola | cytosol, plasma membrane | 45.63 | 80.13 |
| Bra023593.1-P | Field mustard | cytosol | 77.54 | 79.96 |
| CDX70734 | Canola | cytosol | 63.28 | 79.86 |
| AT3G03110.1 | Thale cress | cytosol | 75.94 | 79.18 |
| Bra006382.1-P | Field mustard | cytosol | 76.03 | 78.84 |
| Bra008580.1-P | Field mustard | cytosol | 77.01 | 76.8 |
| CDY23464 | Canola | cytosol | 73.17 | 76.66 |
| Bra021372.1-P | Field mustard | cytosol | 73.26 | 76.25 |
| CDY49924 | Canola | cytosol | 73.44 | 74.98 |
| CDY43150 | Canola | cytosol | 62.12 | 67.21 |
| Bra032016.1-P | Field mustard | cytosol | 62.12 | 67.21 |
| CDY28738 | Canola | cytosol | 63.01 | 67.21 |
| VIT_14s0006g01850.t01 | Wine grape | cytosol | 10.7 | 61.22 |
| CDY49926 | Canola | nucleus | 3.48 | 50.0 |
| VIT_06s0009g01700.t01 | Wine grape | extracellular, peroxisome, plastid | 1.96 | 50.0 |
| CDY49925 | Canola | cytosol, peroxisome, plastid | 1.25 | 43.75 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100384227 | MapMan:23.5.1.2.8 | UniProt:A0A1D6LCD9 | InterPro:ARM-like | InterPro:ARM-type_fold |
| InterPro:CRM1_C_dom | InterPro:Exportin-1/Importin-b-like | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0008536 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N |
| ProteinID:ONM11731.1 | PFAM:PF03810 | PFAM:PF08389 | PFAM:PF08767 | PFscan:PS50166 | PANTHER:PTHR11223 |
| PANTHER:PTHR11223:SF2 | SMART:SM00913 | SMART:SM01102 | SUPFAM:SSF48371 | TMHMM:TMhelix | UniParc:UPI00084578A5 |
| EnsemblPlantsGene:Zm00001d034914 | EnsemblPlants:Zm00001d034914_P037 | EnsemblPlants:Zm00001d034914_T037 | SEG:seg | : | : |
Description
Protein EXPORTIN 1A
Coordinates
chr1:-:305341481..305352422
Molecular Weight (calculated)
128544.0 Da
IEP (calculated)
5.443
GRAVY (calculated)
-0.006
Length
1122 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEKLRDLSQ PVDVTLLDAT VAAFYGTGSK EERSAADQIL RDLQNNPDMW LQVVHILQNS QNLNTKFFAL QILESVIKYR WNALPVDQRD GIKNYISDVI
0101: VQLSSNEVTF RQERLYVNKL NIILVQVLKH EWPARWSSFI PDLVAAAKSS ETLCENCMAI LKLLSEEIFD FSRGEMTQQK IKELKSSLNS EFRLIHELCL
0201: YVLSATQRPE LIRATLATLH AFLSWIPVGF IFESPLLETL LKFFPMAAYR NLTLQCLTEV AALQFGDFYN VQYVKTYTFF IIQLQAILPP EKIPDVYANG
0301: STEEQAFIQN LALFFTSFFK NHMRILETTQ ENIAALLMGL EYLIGISYVD DTEVFKVSLD YWNVFVLELF EAHNQMEPAV TVSMMGLQAQ MVPGMVDGGT
0401: AVKQRRQLYS GPLSKLRMLM ICRMAKPEEV LIVEDENGNI VRETMKDNDV LVQYKIMRET LIYLSHLDHE DTEQQMLKKL SKQLNGEDWS WNNLNTLCWA
0501: IGSISGSMVE EQENRFLVMV IRDLLNLCEI TKGKDNKAVI ASNIMYVVGQ YPRFLRAHWK FLKTVVNKLF EFMHEMHPGV QDMACDTFLK IVQKCKRKFV
0601: TQQVGENEPF VSELLSNLAT TIADLEPHQI HTFYESVGHM IQAESDNTNR DEYLKRLMSL PNQKWAEIIG QASQSIDILK NQDVIRSVLN ILQTNTSVAS
0701: SLGPHFFPQI SLIFLDMLTV YRMYSELVSS TIAEGGPFAS RTSFVKLLRS VKRETLKLIE TFVDKAEDLP HIGKQFVPPM MDPVLGDYAR NVPDARESEV
0801: LSLFATIINK YKGEMLEDVP RIFEAVFQCT LEMITKNFED YPEHRLKFFS LLRAIGTHCF QALIQLSSQQ LKLVIDSINW AFRHTERNIA ETGLSLLLEI
0901: LKKFQASGFQ NQFYKTYFLT IEQEIFAVLT DTFHKPGFKL HVSVLQHLFC AVDGLTEPLW DASSVPYQYT DNAMFVRDYT IKLLGTSFPN MTVTEVTKFV
1001: DGLLSSKLDL PSFKNHIRDF LVQSKEFSVQ DNKDLYAEEA AAQRERERQR MLAIPGLIAP SELQDEMICG SRQSVLPHDC CWGSLSSCGC LDVLAAALTL
1101: VRVLCPSYII LWYIIVCFFG LS
0101: VQLSSNEVTF RQERLYVNKL NIILVQVLKH EWPARWSSFI PDLVAAAKSS ETLCENCMAI LKLLSEEIFD FSRGEMTQQK IKELKSSLNS EFRLIHELCL
0201: YVLSATQRPE LIRATLATLH AFLSWIPVGF IFESPLLETL LKFFPMAAYR NLTLQCLTEV AALQFGDFYN VQYVKTYTFF IIQLQAILPP EKIPDVYANG
0301: STEEQAFIQN LALFFTSFFK NHMRILETTQ ENIAALLMGL EYLIGISYVD DTEVFKVSLD YWNVFVLELF EAHNQMEPAV TVSMMGLQAQ MVPGMVDGGT
0401: AVKQRRQLYS GPLSKLRMLM ICRMAKPEEV LIVEDENGNI VRETMKDNDV LVQYKIMRET LIYLSHLDHE DTEQQMLKKL SKQLNGEDWS WNNLNTLCWA
0501: IGSISGSMVE EQENRFLVMV IRDLLNLCEI TKGKDNKAVI ASNIMYVVGQ YPRFLRAHWK FLKTVVNKLF EFMHEMHPGV QDMACDTFLK IVQKCKRKFV
0601: TQQVGENEPF VSELLSNLAT TIADLEPHQI HTFYESVGHM IQAESDNTNR DEYLKRLMSL PNQKWAEIIG QASQSIDILK NQDVIRSVLN ILQTNTSVAS
0701: SLGPHFFPQI SLIFLDMLTV YRMYSELVSS TIAEGGPFAS RTSFVKLLRS VKRETLKLIE TFVDKAEDLP HIGKQFVPPM MDPVLGDYAR NVPDARESEV
0801: LSLFATIINK YKGEMLEDVP RIFEAVFQCT LEMITKNFED YPEHRLKFFS LLRAIGTHCF QALIQLSSQQ LKLVIDSINW AFRHTERNIA ETGLSLLLEI
0901: LKKFQASGFQ NQFYKTYFLT IEQEIFAVLT DTFHKPGFKL HVSVLQHLFC AVDGLTEPLW DASSVPYQYT DNAMFVRDYT IKLLGTSFPN MTVTEVTKFV
1001: DGLLSSKLDL PSFKNHIRDF LVQSKEFSVQ DNKDLYAEEA AAQRERERQR MLAIPGLIAP SELQDEMICG SRQSVLPHDC CWGSLSSCGC LDVLAAALTL
1101: VRVLCPSYII LWYIIVCFFG LS
0001: MAAEKLRDLS QPIDVVLLDA TVEAFYSTGS KEERASADNI LRDLKANPDT WLQVVHILQN TSSTHTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISDV
0101: IVQLSRDEAS FRTERLYVNK LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS
0301: TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD
0401: GVKSEVTERQ KLYSDPMSKL RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LSKLSKQLSG EEWAWNNLNT
0501: LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT
0701: RVATSLGTFF LSQISLIFLD MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF VPPMMDQVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT
1001: EVTQFVNGLY ESRNDVGRFK DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS
0101: IVQLSRDEAS FRTERLYVNK LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS
0301: TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD
0401: GVKSEVTERQ KLYSDPMSKL RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LSKLSKQLSG EEWAWNNLNT
0501: LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT
0701: RVATSLGTFF LSQISLIFLD MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF VPPMMDQVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT
1001: EVTQFVNGLY ESRNDVGRFK DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS
Arabidopsis Description
XPO1BProtein EXPORTIN 1B [Source:UniProtKB/Swiss-Prot;Acc:F4IZR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.