Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90476 | Sorghum | cytosol | 97.01 | 96.92 |
| TraesCS4A01G317800.1 | Wheat | cytosol, golgi | 94.3 | 94.39 |
| TraesCS5B01G561500.1 | Wheat | cytosol, golgi, unclear | 93.64 | 94.35 |
| TraesCS5D01G568300.3 | Wheat | cytosol | 91.59 | 93.51 |
| Zm00001d034914_P037 | Maize | cytosol | 95.42 | 91.0 |
| HORVU5Hr1G124770.13 | Barley | cytosol | 93.18 | 90.8 |
| VIT_06s0009g01690.t01 | Wine grape | cytosol | 4.49 | 88.89 |
| GSMUA_Achr8P33200_001 | Banana | cytosol | 87.29 | 86.88 |
| VIT_16s0039g02220.t01 | Wine grape | cytosol | 86.54 | 86.06 |
| Zm00001d012815_P022 | Maize | cytosol | 91.31 | 84.88 |
| KRH29017 | Soybean | cytosol, nucleus | 85.05 | 84.49 |
| KRH24046 | Soybean | cytosol, nucleus | 85.05 | 84.49 |
| GSMUA_Achr1P25620_001 | Banana | cytosol | 87.38 | 84.46 |
| Solyc03g096920.2.1 | Tomato | cytosol, nucleus, plastid | 84.77 | 84.37 |
| KRH27740 | Soybean | cytosol | 83.74 | 83.66 |
| KRH77701 | Soybean | cytosol | 83.18 | 83.1 |
| AT5G17020.1 | Thale cress | cytosol | 83.08 | 82.7 |
| CDY02737 | Canola | cytosol | 82.9 | 82.43 |
| CDX70730 | Canola | cytosol | 81.96 | 82.35 |
| CDX85477 | Canola | cytosol | 82.71 | 82.25 |
| CDX69407 | Canola | cytosol | 81.59 | 81.97 |
| CDX78722 | Canola | cytosol | 81.59 | 81.97 |
| CDX70734 | Canola | cytosol | 67.76 | 81.55 |
| CDY69253 | Canola | cytosol, plasma membrane | 48.69 | 81.53 |
| CDY16965 | Canola | cytosol | 81.96 | 81.51 |
| Bra023593.1-P | Field mustard | cytosol | 82.62 | 81.25 |
| Bra006382.1-P | Field mustard | cytosol | 81.4 | 80.5 |
| AT3G03110.1 | Thale cress | cytosol | 80.93 | 80.48 |
| Bra008580.1-P | Field mustard | cytosol | 82.06 | 78.04 |
| CDY23464 | Canola | cytosol | 77.38 | 77.31 |
| Bra021372.1-P | Field mustard | cytosol | 77.48 | 76.9 |
| CDY49924 | Canola | cytosol | 77.57 | 75.52 |
| Bra032016.1-P | Field mustard | cytosol | 65.79 | 67.89 |
| CDY28738 | Canola | cytosol | 66.73 | 67.87 |
| CDY43150 | Canola | cytosol | 65.7 | 67.79 |
| VIT_14s0006g01850.t01 | Wine grape | cytosol | 11.21 | 61.22 |
| CDY49926 | Canola | nucleus | 3.74 | 51.28 |
| VIT_06s0009g01700.t01 | Wine grape | extracellular, peroxisome, plastid | 1.96 | 47.73 |
| CDY49925 | Canola | cytosol, peroxisome, plastid | 1.31 | 43.75 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.8 | EntrezGene:4334849 | ProteinID:AAP21382.1 | InterPro:ARM-like | InterPro:ARM-type_fold |
| ProteinID:BAF13873.1 | ProteinID:BAS87463.1 | ProteinID:BAS87464.1 | InterPro:CRM1_C_dom | InterPro:Exportin-1/Importin-b-like | GO:GO:0000055 |
| GO:GO:0000056 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005049 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0008536 | GO:GO:0009987 | GO:GO:0015074 | GO:GO:0046825 | InterPro:IPR001494 |
| InterPro:IPR011989 | InterPro:Importin-beta_N | EnsemblPlantsGene:Os03g0858100 | EnsemblPlants:Os03t0858100-01 | PFAM:PF03810 | PFAM:PF08389 |
| PFAM:PF08767 | PFscan:PS50166 | PANTHER:PTHR11223 | PANTHER:PTHR11223:SF2 | UniProt:Q84M87 | SMART:SM00913 |
| SMART:SM01102 | SUPFAM:SSF48371 | UniParc:UPI0000190997 | RefSeq:XP_015632087.1 | SEG:seg | : |
Description
Similar to CRM1 protein (Fragment). (Os03t0858100-01);Similar to predicted protein. (Os03t0858100-02)
Coordinates
chr3:-:36212775..36223132
Molecular Weight (calculated)
122804.0 Da
IEP (calculated)
5.434
GRAVY (calculated)
-0.086
Length
1070 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEKLRDLSQ PIDVPLLDAT VAAFYGTGSK EERNAADQIL RDLQNNPDMW LQVVHILQNS HNLNTKFFAL QVLESVIKYR WNALPTEQRD GIKNYISDVI
0101: VQLSSNEASF RQERLYVNKL NIILVQVLKH EWPARWSSFV PDLVAAAKSS ETICENCMAI LKLLSEEIFD FSRGEMTQQK IKELKSSLNS EFRLIHELCL
0201: YVLSATQRPE LIRATLATLH AFLSWIPVGF IFESPLLETL LKFFPMAAYR NLTLQCLTEV AALQFGDFYN VQYVKMYTIF MMQLQAILPP GTIPDAYANG
0301: SSEEQAFIQN LALFFTSFFK NHMRILEASP ENRAALLLGL EYLIGISYVD DTEVFKVCLD YWNVFVLELF EAHNQMEPAA SVNMMGLQAQ MLPGVDGTIT
0401: AVQQRRQLYS GPLSKLRMLM ICRMAKPEEV LIVEDENGNI VRETMKDNDV LVQYKIMRET LIYLSHLDHE DTEQQMLKKL SKQLNGEDWS WNNLNTLCWA
0501: IGSISGSMVE EQENRFLVMV IRDLLNLCEI TKGKDNKAVI ASNIMYVVGQ YPRFLRAHWK FLKTVVNKLF EFMHEMHPGV QDMACDTFLK IVQKCKRKFV
0601: TQQVGENEPF VSELLSSLAT TIGDLEPHQI HTFYESVGHM IQAESDNTKR DEYLKRLMSL PNQKWAEIIG QASQSIDILK NQDVIRSVLN ILQTNTSVAS
0701: SLGPHFFPQI SLIFLDMLTV YRMYSELVSS TIAEGGPFAS RTSFVKLLRS VKRETLKLIE TFVDKAEDLP HIGKQFVPPM MDPILADYAR NVPDARESEV
0801: LSLFATIINK YKGEMLEDVP RIFEAVFQCT LEMITKNFED YPEHRLKFFS LLRAIGTHCF QALIQLSSQQ LKLVIDSINW AFRHTERNIA ETGLSLLLEI
0901: LKNFQASGFQ NQFYKTYFLN IEQEIFAVLT DTFHKPGFKL HVLVLQHLFC VVDGLTEPLW DASSVPYQYT DNAMFVRDYT IKLLGSSFPN MTPTEVTKFV
1001: DGLLSSKHDL PSFKNHIRDF LVQSKEFSAQ DNKDLYAEEA AAQRERERQR MLAIPGLIAP SELQDEMVDS
0101: VQLSSNEASF RQERLYVNKL NIILVQVLKH EWPARWSSFV PDLVAAAKSS ETICENCMAI LKLLSEEIFD FSRGEMTQQK IKELKSSLNS EFRLIHELCL
0201: YVLSATQRPE LIRATLATLH AFLSWIPVGF IFESPLLETL LKFFPMAAYR NLTLQCLTEV AALQFGDFYN VQYVKMYTIF MMQLQAILPP GTIPDAYANG
0301: SSEEQAFIQN LALFFTSFFK NHMRILEASP ENRAALLLGL EYLIGISYVD DTEVFKVCLD YWNVFVLELF EAHNQMEPAA SVNMMGLQAQ MLPGVDGTIT
0401: AVQQRRQLYS GPLSKLRMLM ICRMAKPEEV LIVEDENGNI VRETMKDNDV LVQYKIMRET LIYLSHLDHE DTEQQMLKKL SKQLNGEDWS WNNLNTLCWA
0501: IGSISGSMVE EQENRFLVMV IRDLLNLCEI TKGKDNKAVI ASNIMYVVGQ YPRFLRAHWK FLKTVVNKLF EFMHEMHPGV QDMACDTFLK IVQKCKRKFV
0601: TQQVGENEPF VSELLSSLAT TIGDLEPHQI HTFYESVGHM IQAESDNTKR DEYLKRLMSL PNQKWAEIIG QASQSIDILK NQDVIRSVLN ILQTNTSVAS
0701: SLGPHFFPQI SLIFLDMLTV YRMYSELVSS TIAEGGPFAS RTSFVKLLRS VKRETLKLIE TFVDKAEDLP HIGKQFVPPM MDPILADYAR NVPDARESEV
0801: LSLFATIINK YKGEMLEDVP RIFEAVFQCT LEMITKNFED YPEHRLKFFS LLRAIGTHCF QALIQLSSQQ LKLVIDSINW AFRHTERNIA ETGLSLLLEI
0901: LKNFQASGFQ NQFYKTYFLN IEQEIFAVLT DTFHKPGFKL HVLVLQHLFC VVDGLTEPLW DASSVPYQYT DNAMFVRDYT IKLLGSSFPN MTPTEVTKFV
1001: DGLLSSKHDL PSFKNHIRDF LVQSKEFSAQ DNKDLYAEEA AAQRERERQR MLAIPGLIAP SELQDEMVDS
0001: MAAEKLRDLS QPIDVGVLDA TVAAFFVTGS KEERAAADQI LRDLQANPDM WLQVVHILQN TNSLDTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG
0401: LGSQVMQRRQ LYSHPMSKLR GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML RKLNKQLSGE EWAWNNLNTL
0501: CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR
0601: KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS
0701: AATSLGTYFL SQISLIFLDM LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV PPMMESVLGD YARNVPDARE
0801: SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFRHTER NIAETGLNLL
0901: LEMLKNFQQS EFCNQFYRSY FMQIEQEIFA VLTDTFHKPG FKLHVLVLQQ LFCLPESGAL TEPLWDATTV PYPYPDNVAF VREYTIKLLS SSFPNMTAAE
1001: VTQFVNGLYE SRNDPSGFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMLSIP GLIAPNEIQD EMVDS
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG
0401: LGSQVMQRRQ LYSHPMSKLR GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML RKLNKQLSGE EWAWNNLNTL
0501: CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR
0601: KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS
0701: AATSLGTYFL SQISLIFLDM LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV PPMMESVLGD YARNVPDARE
0801: SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFRHTER NIAETGLNLL
0901: LEMLKNFQQS EFCNQFYRSY FMQIEQEIFA VLTDTFHKPG FKLHVLVLQQ LFCLPESGAL TEPLWDATTV PYPYPDNVAF VREYTIKLLS SSFPNMTAAE
1001: VTQFVNGLYE SRNDPSGFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMLSIP GLIAPNEIQD EMVDS
Arabidopsis Description
XPO1XPO1A [Source:UniProtKB/TrEMBL;Acc:A0A178U9W2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.