Factsheet for VIT_14s0006g01850.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69253	Canola	cytosol, plasma membrane	62.76	19.25
CDX70734	Canola	cytosol	62.76	13.84
VIT_16s0039g02220.t01	Wine grape	cytosol	73.47	13.38
KRH29017	Soybean	cytosol, nucleus	68.88	12.53
KRH24046	Soybean	cytosol, nucleus	68.37	12.44
KRH27740	Soybean	cytosol	66.84	12.23
KRH77701	Soybean	cytosol	66.33	12.14
AT5G17020.1	Thale cress	cytosol	66.33	12.09
CDX85477	Canola	cytosol	66.33	12.08
CDX69407	Canola	cytosol	65.31	12.02
Solyc03g096920.2.1	Tomato	cytosol, nucleus, plastid	65.82	12.0
CDY02737	Canola	cytosol	65.82	11.99
Bra023593.1-P	Field mustard	cytosol	66.33	11.95
CDX70730	Canola	cytosol	64.8	11.92
CDY16965	Canola	cytosol	65.31	11.9
GSMUA_Achr8P33200_001	Banana	cytosol	64.8	11.81
AT3G03110.1	Thale cress	cytosol	64.29	11.71
CDX78722	Canola	cytosol	62.76	11.55
EER90476	Sorghum	cytosol	62.24	11.39
Bra008580.1-P	Field mustard	cytosol	65.31	11.38
TraesCS5D01G568300.3	Wheat	cytosol	60.71	11.36
GSMUA_Achr1P25620_001	Banana	cytosol	63.78	11.29
Bra006382.1-P	Field mustard	cytosol	62.24	11.28
Bra021372.1-P	Field mustard	cytosol	61.73	11.22
Os03t0858100-01	Rice	cytosol, plasma membrane	61.22	11.21
TraesCS5B01G561500.1	Wheat	cytosol, golgi, unclear	60.71	11.21
TraesCS4A01G317800.1	Wheat	cytosol, golgi	60.71	11.13
CDY23464	Canola	cytosol	60.2	11.02
CDY49924	Canola	cytosol	61.73	11.01
EER98405	Sorghum	cytosol	59.69	10.97
HORVU5Hr1G124770.13	Barley	cytosol	60.71	10.84
Zm00001d034914_P037	Maize	cytosol	61.22	10.7
Zm00001d012815_P022	Maize	cytosol	61.22	10.43
Bra032016.1-P	Field mustard	cytosol	52.55	9.93
CDY43150	Canola	cytosol	52.55	9.93
CDY28738	Canola	cytosol	51.02	9.51
CDY49925	Canola	cytosol, peroxisome, plastid	0.51	3.12
CDY49926	Canola	nucleus	0.0	0.0
VIT_06s0009g01690.t01	Wine grape	cytosol	0.0	0.0
VIT_06s0009g01700.t01	Wine grape	extracellular, peroxisome, plastid	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.8	InterPro:ARM-like	InterPro:ARM-type_fold	ProteinID:CCB57663	ProteinID:CCB57663.1
InterPro:CRM1_C_dom	UniProt:F6HSM2	EMBL:FN596245	GO:GO:0000055	GO:GO:0000056	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005049	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006810	GO:GO:0006890
GO:GO:0008150	GO:GO:0046825	InterPro:IPR011989	PFAM:PF08767	PANTHER:PTHR11223	PANTHER:PTHR11223:SF2
SMART:SM01102	SUPFAM:SSF48371	UniParc:UPI000210805D	ArrayExpress:VIT_14s0006g01850	EnsemblPlantsGene:VIT_14s0006g01850	EnsemblPlants:VIT_14s0006g01850.t01

Description

No Description!

Coordinates

chr14:-:18457006..18458645

Molecular Weight (calculated)

22093.1 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.022

Length

196 amino acids

Sequence
(BLAST)

001: MIQVESNPQK KDECLQKLME LSNQKWAEIV VQARQSVDFL KDQDVIQTML NILQTNASVV TSLGTYFLSQ ITLIFLDMLN VCRMYSELIS NIIAEGRPFA
101: SKTSYIKLLP LVKGETHKLI EIFMNKAEDQ SQIGKQLVSL MMDLVLGDYT RNVPDARESE VLSLFESSTN SGEVPGCNAI HVTKIKNKLG CVIKKF

Best Arabidopsis Sequence Match ( AT5G17020.2 )
(BLAST)

0001: MAAEKLRDLS QPIDVGVLDA TVAAFFVTGS KEERAAADQI LRDLQANPDM WLQVVHILQN TNSLDTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQFHI RVLESTPEVV SLLLAGLEYL INISYVDDTE VFKVCLDYWN SLVLELFDAH HNSDNPAVSA SLMGLQPFLP GMVDGLGSQV MQRRQLYSHP
0401: MSKLRGLMIN RMAKPEEVLI VEDENGNIVR ETMKDNDVLV QYKIMRETLI YLSHLDHDDT EKQMLRKLNK QLSGEEWAWN NLNTLCWAIG SISGSMAEDQ
0501: ENRFLVMVIR DLLNLCEITK GKDNKAVIAS NIMYVVGQYP RFLRAHWKFL KTVVNKLFEF MHETHPGVQD MACDTFLKIV QKCKRKFVIV QVGENEPFVS
0601: ELLTGLATTV QDLEPHQIHS FYESVGNMIQ AESDPQKRDE YLQRLMALPN QKWAEIIGQA RHSVEFLKDQ VVIRTVLNIL QTNTSAATSL GTYFLSQISL
0701: IFLDMLNVYR MYSELVSTNI TEGGPYASKT SFVKLLRSVK RETLKLIETF LDKAEDQPHI GKQFVPPMME SVLGDYARNV PDARESEVLS LFATIINKYK
0801: ATMLDDVPHI FEAVFQCTLE MITKNFEDYP EHRLKFFSLL RAIATFCFPA LIKLSSPQLK LVMDSIIWAF RHTERNIAET GLNLLLEMLK NFQQSEFCNQ
0901: FYRSYFMQIE QEIFAVLTDT FHKPGFKLHV LVLQQLFCLP ESGALTEPLW DATTVPYPYP DNVAFVREYT IKLLSSSFPN MTAAEVTQFV NGLYESRNDP
1001: SGFKNNIRDF LVQSKEFSAQ DNKDLYAEEA AAQRERERQR MLSIPGLIAP NEIQDEMVDS

Arabidopsis Description

XPO1XPO1A [Source:UniProtKB/TrEMBL;Acc:A0A178U9W2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.