Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021372.1-P | Field mustard | cytosol | 99.25 | 98.61 |
| CDY49924 | Canola | cytosol | 98.88 | 96.36 |
| AT3G03110.1 | Thale cress | cytosol | 87.49 | 87.08 |
| CDY02737 | Canola | cytosol | 83.01 | 82.62 |
| CDX85477 | Canola | cytosol | 82.91 | 82.53 |
| CDX69407 | Canola | cytosol | 81.79 | 82.25 |
| CDX70730 | Canola | cytosol | 81.33 | 81.78 |
| CDX78722 | Canola | cytosol | 81.33 | 81.78 |
| CDY16965 | Canola | cytosol | 82.07 | 81.69 |
| VIT_06s0009g01690.t01 | Wine grape | cytosol | 4.11 | 81.48 |
| CDX70734 | Canola | cytosol | 67.32 | 81.1 |
| CDY69253 | Canola | cytosol, plasma membrane | 48.37 | 81.06 |
| VIT_16s0039g02220.t01 | Wine grape | cytosol | 81.23 | 80.86 |
| Solyc03g096920.2.1 | Tomato | cytosol, nucleus, plastid | 80.02 | 79.72 |
| KRH29017 | Soybean | cytosol, nucleus | 79.65 | 79.2 |
| KRH24046 | Soybean | cytosol, nucleus | 79.65 | 79.2 |
| KRH27740 | Soybean | cytosol | 79.08 | 79.08 |
| KRH77701 | Soybean | cytosol | 78.52 | 78.52 |
| GSMUA_Achr8P33200_001 | Banana | cytosol | 78.52 | 78.23 |
| EER90476 | Sorghum | cytosol | 77.4 | 77.4 |
| Os03t0858100-01 | Rice | cytosol, plasma membrane | 77.31 | 77.38 |
| TraesCS5B01G561500.1 | Wheat | cytosol, golgi, unclear | 76.19 | 76.84 |
| TraesCS4A01G317800.1 | Wheat | cytosol, golgi | 76.47 | 76.61 |
| TraesCS5D01G568300.3 | Wheat | cytosol | 74.32 | 75.95 |
| GSMUA_Achr1P25620_001 | Banana | cytosol | 78.43 | 75.88 |
| EER98405 | Sorghum | cytosol | 75.54 | 75.82 |
| CDY43150 | Canola | cytosol | 72.18 | 74.54 |
| HORVU5Hr1G124770.13 | Barley | cytosol | 76.28 | 74.41 |
| CDY28738 | Canola | cytosol | 71.9 | 73.19 |
| Zm00001d034914_P037 | Maize | cytosol | 76.66 | 73.17 |
| Zm00001d012815_P022 | Maize | cytosol | 74.14 | 68.98 |
| CDY49926 | Canola | nucleus | 4.76 | 65.38 |
| CDY49925 | Canola | cytosol, peroxisome, plastid | 1.87 | 62.5 |
| VIT_14s0006g01850.t01 | Wine grape | cytosol | 11.02 | 60.2 |
| VIT_06s0009g01700.t01 | Wine grape | extracellular, peroxisome, plastid | 1.12 | 27.27 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.8 | GO:A0A078GDN1 | UniProt:A0A078GDN1 | InterPro:ARM-like | InterPro:ARM-type_fold |
| EnsemblPlants:CDY23464 | ProteinID:CDY23464 | ProteinID:CDY23464.1 | InterPro:CRM1_C_dom | InterPro:Exportin-1/Importin-b-like | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0008536 | EnsemblPlantsGene:GSBRNA2T00022082001 | InterPro:IPR001494 |
| InterPro:IPR011989 | InterPro:Importin-beta_N | PFAM:PF03810 | PFAM:PF08389 | PFAM:PF08767 | PFscan:PS50166 |
| PANTHER:PTHR11223 | PANTHER:PTHR11223:SF2 | SMART:SM00913 | SMART:SM01102 | SUPFAM:SSF48371 | UniParc:UPI0004EF12F2 |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g49920DBnaC04g49920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDN1]
Coordinates
chrLK032143:-:607362..614154
Molecular Weight (calculated)
122849.0 Da
IEP (calculated)
5.881
GRAVY (calculated)
-0.084
Length
1071 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAEKLRDLS QPIDVTLLDA TVESFYATGS KDERAAADNI LRELKANPDT WLQVVHILQS TRSTHTKYFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV
0101: IVQLSGDEGS FRAERLYVNK LNVILVQIVK HEWPAKWRSF IPDLVKAAKT SETLCENCMA ILKLLSEEVF DFSKGEMTQQ KIKEMKESLN RQFLLIHELC
0201: LYVLSASKRP ELIRSTLSAL HAYLSWIPLG YIFESPLLET LLKFFPEPAY RNLTLQCLSE VAALNCGDFY NGQYVKMYGI FMGQLQAMLP LNINIPEAYS
0301: NGSDEEQASL LRALDVWSHI KVLESAPEII SLLLVGLEYL ISISYVDDIE VFKVCLDYWN SLVSELFTLH HHVGHPGLTP SLFGLQMACL PRTAGSIKPE
0401: VTERQKLYAD PLSKLRGLMI SRMAKPEEVI IVEDENGNIV RETMKDNDVL VQYKIMRETL IYLSHLGHDD TERQMLSKLS KQLSGEEWAW NNLNTLCWAI
0501: GSISGSMDVD QENRFLVMVI RDLLSLCEII KGKDNKAVIA SNIMYVVGQY SRFLRAHWKF LKTVVHKLFE FMHETHPGVQ DMACDTFLKI VQKCKRKFVI
0601: LQVGEKEPFV SELLSGLVTI VGDLEPHQIH TFYESVGSMI QAETDPQKRS KYIQRLMDLP NQKWTEIIGQ ARQNADILKD PDMIRTVLSI LQTNTRVATS
0701: LGTHFLPQIS LIFLDMLNVY RMYSELVSSN IAEGGPYASR TSVVKLLRSV KREILRLIET FLEKAEYQPH IGKQFVPPMM DPVLGDYARN VPDARESEVL
0801: SLFATIINKY KVNMQDEVPR IFEAVFQCTL EMITKNFEDY PEHRLKFFSL LRAIATFCFP ALVQLSSEQL KLVMDSVIWA FRHTERNIAE TGLNLLLELL
0901: KKFQKSDFSN QFYRTYFMQI EQEIFAVLTD TFHKPGFKFH VLVLQHLFSL VESKSLTEPL WDASTVLQQY PNNAAFVLEY TIKLLSSSFP NMTTSEVTQF
1001: VNGLYESRSD IARFKNNIRD FLVQSKEFSA QDNKDLYAEE AAAQIERDIQ KMLLIPGLIA PNEIQDDMAD S
0101: IVQLSGDEGS FRAERLYVNK LNVILVQIVK HEWPAKWRSF IPDLVKAAKT SETLCENCMA ILKLLSEEVF DFSKGEMTQQ KIKEMKESLN RQFLLIHELC
0201: LYVLSASKRP ELIRSTLSAL HAYLSWIPLG YIFESPLLET LLKFFPEPAY RNLTLQCLSE VAALNCGDFY NGQYVKMYGI FMGQLQAMLP LNINIPEAYS
0301: NGSDEEQASL LRALDVWSHI KVLESAPEII SLLLVGLEYL ISISYVDDIE VFKVCLDYWN SLVSELFTLH HHVGHPGLTP SLFGLQMACL PRTAGSIKPE
0401: VTERQKLYAD PLSKLRGLMI SRMAKPEEVI IVEDENGNIV RETMKDNDVL VQYKIMRETL IYLSHLGHDD TERQMLSKLS KQLSGEEWAW NNLNTLCWAI
0501: GSISGSMDVD QENRFLVMVI RDLLSLCEII KGKDNKAVIA SNIMYVVGQY SRFLRAHWKF LKTVVHKLFE FMHETHPGVQ DMACDTFLKI VQKCKRKFVI
0601: LQVGEKEPFV SELLSGLVTI VGDLEPHQIH TFYESVGSMI QAETDPQKRS KYIQRLMDLP NQKWTEIIGQ ARQNADILKD PDMIRTVLSI LQTNTRVATS
0701: LGTHFLPQIS LIFLDMLNVY RMYSELVSSN IAEGGPYASR TSVVKLLRSV KREILRLIET FLEKAEYQPH IGKQFVPPMM DPVLGDYARN VPDARESEVL
0801: SLFATIINKY KVNMQDEVPR IFEAVFQCTL EMITKNFEDY PEHRLKFFSL LRAIATFCFP ALVQLSSEQL KLVMDSVIWA FRHTERNIAE TGLNLLLELL
0901: KKFQKSDFSN QFYRTYFMQI EQEIFAVLTD TFHKPGFKFH VLVLQHLFSL VESKSLTEPL WDASTVLQQY PNNAAFVLEY TIKLLSSSFP NMTTSEVTQF
1001: VNGLYESRSD IARFKNNIRD FLVQSKEFSA QDNKDLYAEE AAAQIERDIQ KMLLIPGLIA PNEIQDDMAD S
0001: MAAEKLRDLS QPIDVVLLDA TVEAFYSTGS KEERASADNI LRDLKANPDT WLQVVHILQN TSSTHTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISDV
0101: IVQLSRDEAS FRTERLYVNK LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS
0301: TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD
0401: GVKSEVTERQ KLYSDPMSKL RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LSKLSKQLSG EEWAWNNLNT
0501: LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT
0701: RVATSLGTFF LSQISLIFLD MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF VPPMMDQVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT
1001: EVTQFVNGLY ESRNDVGRFK DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS
0101: IVQLSRDEAS FRTERLYVNK LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS
0301: TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD
0401: GVKSEVTERQ KLYSDPMSKL RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LSKLSKQLSG EEWAWNNLNT
0501: LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT
0701: RVATSLGTFF LSQISLIFLD MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF VPPMMDQVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT
1001: EVTQFVNGLY ESRNDVGRFK DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS
Arabidopsis Description
XPO1BProtein EXPORTIN 1B [Source:UniProtKB/Swiss-Prot;Acc:F4IZR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.