Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0009g01690.t01 | Wine grape | cytosol | 4.74 | 94.44 |
| KRH29017 | Soybean | cytosol, nucleus | 91.91 | 91.83 |
| KRH24046 | Soybean | cytosol, nucleus | 91.82 | 91.74 |
| Solyc03g096920.2.1 | Tomato | cytosol, nucleus, plastid | 90.99 | 91.07 |
| KRH27740 | Soybean | cytosol | 89.5 | 89.92 |
| KRH77701 | Soybean | cytosol | 88.94 | 89.36 |
| GSMUA_Achr8P33200_001 | Banana | cytosol | 88.85 | 88.93 |
| AT5G17020.1 | Thale cress | cytosol | 88.38 | 88.47 |
| CDY02737 | Canola | cytosol | 88.01 | 88.01 |
| CDX85477 | Canola | cytosol | 87.83 | 87.83 |
| CDX70730 | Canola | cytosol | 86.62 | 87.51 |
| GSMUA_Achr1P25620_001 | Banana | cytosol | 89.68 | 87.17 |
| CDX78722 | Canola | cytosol | 86.25 | 87.14 |
| CDX69407 | Canola | cytosol | 86.25 | 87.14 |
| CDY16965 | Canola | cytosol | 86.99 | 86.99 |
| CDX70734 | Canola | cytosol | 71.84 | 86.95 |
| Bra023593.1-P | Field mustard | cytosol | 87.73 | 86.76 |
| EER90476 | Sorghum | cytosol | 86.15 | 86.55 |
| Os03t0858100-01 | Rice | cytosol, plasma membrane | 86.06 | 86.54 |
| TraesCS5B01G561500.1 | Wheat | cytosol, golgi, unclear | 84.67 | 85.78 |
| CDY69253 | Canola | cytosol, plasma membrane | 50.93 | 85.76 |
| TraesCS4A01G317800.1 | Wheat | cytosol, golgi | 85.13 | 85.69 |
| Bra006382.1-P | Field mustard | cytosol | 86.06 | 85.58 |
| TraesCS5D01G568300.3 | Wheat | cytosol | 82.62 | 84.83 |
| AT3G03110.1 | Thale cress | cytosol | 84.2 | 84.2 |
| EER98405 | Sorghum | cytosol | 82.81 | 83.51 |
| Bra008580.1-P | Field mustard | cytosol | 87.08 | 83.29 |
| HORVU5Hr1G124770.13 | Barley | cytosol | 84.57 | 82.88 |
| Zm00001d034914_P037 | Maize | cytosol | 85.22 | 81.73 |
| CDY23464 | Canola | cytosol | 80.86 | 81.23 |
| Bra021372.1-P | Field mustard | cytosol | 81.13 | 80.98 |
| CDY49924 | Canola | cytosol | 81.23 | 79.53 |
| Zm00001d012815_P022 | Maize | cytosol | 82.25 | 76.89 |
| VIT_14s0006g01850.t01 | Wine grape | cytosol | 13.38 | 73.47 |
| VIT_06s0009g01700.t01 | Wine grape | extracellular, peroxisome, plastid | 2.88 | 70.45 |
| Bra032016.1-P | Field mustard | cytosol | 67.66 | 70.2 |
| CDY43150 | Canola | cytosol | 67.57 | 70.11 |
| CDY28738 | Canola | cytosol | 68.03 | 69.58 |
| CDY49926 | Canola | nucleus | 4.18 | 57.69 |
| CDY49925 | Canola | cytosol, peroxisome, plastid | 1.39 | 46.88 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100256288 | wikigene:100256288 | MapMan:23.5.1.2.8 | UniProt:A5BVQ5 | EMBL:AM472935 |
| InterPro:ARM-like | InterPro:ARM-type_fold | ProteinID:CAN61845 | ProteinID:CAN61845.1 | ProteinID:CBI26535 | ProteinID:CBI26535.3 |
| InterPro:CRM1_C_dom | InterPro:Exportin-1/Importin-b-like | EMBL:FN595750 | GO:GO:0000055 | GO:GO:0000056 | GO:GO:0003674 |
| GO:GO:0005049 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0008536 | GO:GO:0046825 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | EntrezGene:LOC100256288 |
| wikigene:LOC100256288 | PFAM:PF03810 | PFAM:PF08389 | PFAM:PF08767 | PFscan:PS50166 | PANTHER:PTHR11223 |
| PANTHER:PTHR11223:SF2 | SMART:SM00913 | SMART:SM01102 | SUPFAM:SSF48371 | TIGR:TC62828 | UniParc:UPI0001521E67 |
| ArrayExpress:VIT_16s0039g02220 | EnsemblPlantsGene:VIT_16s0039g02220 | EnsemblPlants:VIT_16s0039g02220.t01 | unigene:Vvi.12730 | RefSeq:XP_002275630 | RefSeq:XP_002275630.1 |
| RefSeq:XP_003633991 | RefSeq:XP_003633991.1 | RefSeq:XP_003633992 | RefSeq:XP_003633992.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr16:+:2314803..2333048
Molecular Weight (calculated)
123945.0 Da
IEP (calculated)
5.388
GRAVY (calculated)
-0.091
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAEKLRDLS QPIDVALLDA TVAAFYGTGS KEERTAADQI LRELQNNPDM WLQVVHILQS TQNLNTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV
0101: IVQLSSNEAS FRRERLYVNK LNIILVQVLK HEWPARWRSF IPDLVSAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRT ELIRATLATL HAFLSWIPLG YIFESPLLET LLKFFPVPSY RNLTLQCLTE VAALNFGDFY NLQYVKMYNI FMVQLQSILP TTTNIPEAYA
0301: HGSSEEQAFI QNLALFFTSF YKSHIRVLES SQENISALLL GLEYLIGISY VDDTEVFKVC LDYWNSLVLE LFEAHHNLDN PAVAANMMGL QIPLIPGMVD
0401: GLGSQLLQRR QLYSGPMSKL RLLMICRMAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LKKLSKQLKG EDWTWNNLNT
0501: LCWAIGSISG SMMEEQENRF LVMVIRDLLN LCEITKGKDN KAVIASNIMY VVGQYPKFLR AHWKFLKTVV NKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIIQVGE NEPFVSELLS GLPSTIADLE PHQIHTFYES VGHMIQAESD PQKRDEYLQR LMELPNQKWA EIIGQARQSV DFLKDQDVIR TVLNILQTNT
0701: SVATSLGTYF LSQITLIFLD MLNVYRMYSE LISNSIAEGG PFASKTSYVK LLRSVKRETL KLIETFLDKA EDQPQIGKQF VPPMMDPVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKGAMI EDVPRIFEAS FQCTLEMITK NFEDYPEHRL KFFSLLRAIA THCFPALIRL SSQQLKLVMD SIIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQA SEFCNQFYRT YFLTIEQEIF AVLTDTFHKP GFKLHVLVLQ HLFCLVESGA LTEPLWDVST VAYPYPNNTM FVREYTIKLL STSFPNMTTS
1001: EVTQFVTGLF ESRNDLSTFK NHIRDFLVQS KEFSAQDNKD LYAEEAAAQR ERERQRMLSI PGLIAPNEIQ DEMLDS
0101: IVQLSSNEAS FRRERLYVNK LNIILVQVLK HEWPARWRSF IPDLVSAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRT ELIRATLATL HAFLSWIPLG YIFESPLLET LLKFFPVPSY RNLTLQCLTE VAALNFGDFY NLQYVKMYNI FMVQLQSILP TTTNIPEAYA
0301: HGSSEEQAFI QNLALFFTSF YKSHIRVLES SQENISALLL GLEYLIGISY VDDTEVFKVC LDYWNSLVLE LFEAHHNLDN PAVAANMMGL QIPLIPGMVD
0401: GLGSQLLQRR QLYSGPMSKL RLLMICRMAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LKKLSKQLKG EDWTWNNLNT
0501: LCWAIGSISG SMMEEQENRF LVMVIRDLLN LCEITKGKDN KAVIASNIMY VVGQYPKFLR AHWKFLKTVV NKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIIQVGE NEPFVSELLS GLPSTIADLE PHQIHTFYES VGHMIQAESD PQKRDEYLQR LMELPNQKWA EIIGQARQSV DFLKDQDVIR TVLNILQTNT
0701: SVATSLGTYF LSQITLIFLD MLNVYRMYSE LISNSIAEGG PFASKTSYVK LLRSVKRETL KLIETFLDKA EDQPQIGKQF VPPMMDPVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKGAMI EDVPRIFEAS FQCTLEMITK NFEDYPEHRL KFFSLLRAIA THCFPALIRL SSQQLKLVMD SIIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQA SEFCNQFYRT YFLTIEQEIF AVLTDTFHKP GFKLHVLVLQ HLFCLVESGA LTEPLWDVST VAYPYPNNTM FVREYTIKLL STSFPNMTTS
1001: EVTQFVTGLF ESRNDLSTFK NHIRDFLVQS KEFSAQDNKD LYAEEAAAQR ERERQRMLSI PGLIAPNEIQ DEMLDS
0001: MAAEKLRDLS QPIDVGVLDA TVAAFFVTGS KEERAAADQI LRDLQANPDM WLQVVHILQN TNSLDTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG
0401: LGSQVMQRRQ LYSHPMSKLR GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML RKLNKQLSGE EWAWNNLNTL
0501: CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR
0601: KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS
0701: AATSLGTYFL SQISLIFLDM LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV PPMMESVLGD YARNVPDARE
0801: SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFRHTER NIAETGLNLL
0901: LEMLKNFQQS EFCNQFYRSY FMQIEQEIFA VLTDTFHKPG FKLHVLVLQQ LFCLPESGAL TEPLWDATTV PYPYPDNVAF VREYTIKLLS SSFPNMTAAE
1001: VTQFVNGLYE SRNDPSGFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMLSIP GLIAPNEIQD EMVDS
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG
0401: LGSQVMQRRQ LYSHPMSKLR GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML RKLNKQLSGE EWAWNNLNTL
0501: CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR
0601: KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS
0701: AATSLGTYFL SQISLIFLDM LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV PPMMESVLGD YARNVPDARE
0801: SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFRHTER NIAETGLNLL
0901: LEMLKNFQQS EFCNQFYRSY FMQIEQEIFA VLTDTFHKPG FKLHVLVLQQ LFCLPESGAL TEPLWDATTV PYPYPDNVAF VREYTIKLLS SSFPNMTAAE
1001: VTQFVNGLYE SRNDPSGFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMLSIP GLIAPNEIQD EMVDS
Arabidopsis Description
XPO1XPO1A [Source:UniProtKB/TrEMBL;Acc:A0A178U9W2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.