Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23464 | Canola | cytosol | 96.36 | 98.88 |
| AT3G03110.1 | Thale cress | cytosol | 85.35 | 87.17 |
| VIT_06s0009g01690.t01 | Wine grape | cytosol | 4.09 | 83.33 |
| CDX85477 | Canola | cytosol | 81.53 | 83.27 |
| CDY02737 | Canola | cytosol | 81.26 | 82.99 |
| CDX69407 | Canola | cytosol | 80.25 | 82.82 |
| CDX70730 | Canola | cytosol | 79.98 | 82.54 |
| CDX78722 | Canola | cytosol | 79.8 | 82.35 |
| CDY16965 | Canola | cytosol | 80.53 | 82.25 |
| CDX70734 | Canola | cytosol | 66.15 | 81.78 |
| VIT_16s0039g02220.t01 | Wine grape | cytosol | 79.53 | 81.23 |
| CDY69253 | Canola | cytosol, plasma membrane | 47.13 | 81.06 |
| Solyc03g096920.2.1 | Tomato | cytosol, nucleus, plastid | 78.43 | 80.19 |
| KRH29017 | Soybean | cytosol, nucleus | 77.98 | 79.57 |
| KRH24046 | Soybean | cytosol, nucleus | 77.98 | 79.57 |
| KRH27740 | Soybean | cytosol | 77.34 | 79.37 |
| KRH77701 | Soybean | cytosol | 76.8 | 78.8 |
| GSMUA_Achr8P33200_001 | Banana | cytosol | 76.89 | 78.6 |
| EER90476 | Sorghum | cytosol | 75.61 | 77.59 |
| Os03t0858100-01 | Rice | cytosol, plasma membrane | 75.52 | 77.57 |
| TraesCS5B01G561500.1 | Wheat | cytosol, golgi, unclear | 74.52 | 77.12 |
| TraesCS4A01G317800.1 | Wheat | cytosol, golgi | 74.8 | 76.89 |
| EER98405 | Sorghum | cytosol | 74.07 | 76.29 |
| TraesCS5D01G568300.3 | Wheat | cytosol | 72.7 | 76.24 |
| GSMUA_Achr1P25620_001 | Banana | cytosol | 76.71 | 76.15 |
| HORVU5Hr1G124770.13 | Barley | cytosol | 74.61 | 74.68 |
| CDY43150 | Canola | cytosol | 70.43 | 74.64 |
| Zm00001d034914_P037 | Maize | cytosol | 74.98 | 73.44 |
| CDY28738 | Canola | cytosol | 70.25 | 73.38 |
| Zm00001d012815_P022 | Maize | cytosol | 72.79 | 69.5 |
| CDY49926 | Canola | nucleus | 4.55 | 64.1 |
| VIT_14s0006g01850.t01 | Wine grape | cytosol | 11.01 | 61.73 |
| CDY49925 | Canola | cytosol, peroxisome, plastid | 1.73 | 59.38 |
| VIT_06s0009g01700.t01 | Wine grape | extracellular, peroxisome, plastid | 1.09 | 27.27 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.8 | GO:A0A078IKG7 | UniProt:A0A078IKG7 | InterPro:ARM-like | InterPro:ARM-type_fold |
| EnsemblPlants:CDY49924 | ProteinID:CDY49924 | ProteinID:CDY49924.1 | InterPro:CRM1_C_dom | InterPro:Exportin-1/Importin-b-like | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0008536 | EnsemblPlantsGene:GSBRNA2T00094090001 | InterPro:IPR001494 |
| InterPro:IPR011989 | InterPro:Importin-beta_N | PFAM:PF03810 | PFAM:PF08389 | PFAM:PF08767 | PFscan:PS50166 |
| PANTHER:PTHR11223 | PANTHER:PTHR11223:SF2 | SMART:SM00913 | SMART:SM01102 | SUPFAM:SSF48371 | UniParc:UPI0004EDC5A8 |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng18340DBnaCnng18340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKG7]
Coordinates
chrLK032869:+:18598..25482
Molecular Weight (calculated)
126060.0 Da
IEP (calculated)
5.658
GRAVY (calculated)
-0.063
Length
1099 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAEKLRDLS QPIDVTLLDA TVESFYATGS KDERAAADNI LRELKANPDT WLQVVHILQS TRSTHTKYFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV
0101: IVQLSGDEGS FRAERLYVNK LNVILVQIVK HEWPAKWRSF IPDLVKAAKT SETLCENCMA ILKLLSEEVF DFSKGEMTQQ KIKEMKESLN RQFLLIHELC
0201: LYVLSASQRP ELIRSTLSAL HAYLSWIPLG YIFESPLLET LLKFFPEPAY RNLTLQCLSE VAALNCGDFY NGQYVKMYGI FMGQLQTMLP LNINIPEAYS
0301: NGSDEEQASL LRALDVLCGF SLNFRLYICV NEGRGFAFFF LSHIKVLESA PEIISLLLVG LEYLISISYV DDTEVFKVCL DYWNSLVSEL FTLHHHVGHP
0401: GLTPSLFGLQ MACLPRTAGS IKPEVTERQK LYADSLSKLR GLMISRMAKP EEVIIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL GHDDTERQML
0501: SKLSKQLSGE EWTWNNLNTL CWAIGSISGS MDVDQENRFL VMVIRDLLNL CEIIKGKDNK AVIASNIMYV VGQYSRFLRA HWKFLKTVVH KLFEFMHETH
0601: PGVQDMACDT FLKIVQKCKR KFVILQVGEK EPFVSELLSG LVTIVGDLEP HQIHTFYESV GSMIQAETDP QKRSEYIQRL MDLPNQKWTE IIGQARQNAD
0701: ILKDPDMIRT VLSILQTNTR VATSLGTHFL SQISLIFLDM LNVYRMYSEL VSSNIAEGGP YASRTSVVKL LRSVKREILR LIETFLEKAE YQSHIGKQFV
0801: PPMMDPVLGD YARNVPDARE SEVLSLFATI INKYKVNMQD EVPRIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALVQLS SEQLKLVMDS
0901: VIWAFRHTER NIAETGLNLL LELLKKFQKS DFSNQFYRTY FMQIEQEIFA VLTDTFHKPG FKFHVLVLQH LFSLVESKSL TEPLWDASTV LQQYPNNAAF
1001: VLEYTIKLLS SSFPNMTTAE VTQFVNGLYE SRSDIARFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQIE RDIQNMLLIP GLIAPNEIQD DMADSYTIS
0101: IVQLSGDEGS FRAERLYVNK LNVILVQIVK HEWPAKWRSF IPDLVKAAKT SETLCENCMA ILKLLSEEVF DFSKGEMTQQ KIKEMKESLN RQFLLIHELC
0201: LYVLSASQRP ELIRSTLSAL HAYLSWIPLG YIFESPLLET LLKFFPEPAY RNLTLQCLSE VAALNCGDFY NGQYVKMYGI FMGQLQTMLP LNINIPEAYS
0301: NGSDEEQASL LRALDVLCGF SLNFRLYICV NEGRGFAFFF LSHIKVLESA PEIISLLLVG LEYLISISYV DDTEVFKVCL DYWNSLVSEL FTLHHHVGHP
0401: GLTPSLFGLQ MACLPRTAGS IKPEVTERQK LYADSLSKLR GLMISRMAKP EEVIIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL GHDDTERQML
0501: SKLSKQLSGE EWTWNNLNTL CWAIGSISGS MDVDQENRFL VMVIRDLLNL CEIIKGKDNK AVIASNIMYV VGQYSRFLRA HWKFLKTVVH KLFEFMHETH
0601: PGVQDMACDT FLKIVQKCKR KFVILQVGEK EPFVSELLSG LVTIVGDLEP HQIHTFYESV GSMIQAETDP QKRSEYIQRL MDLPNQKWTE IIGQARQNAD
0701: ILKDPDMIRT VLSILQTNTR VATSLGTHFL SQISLIFLDM LNVYRMYSEL VSSNIAEGGP YASRTSVVKL LRSVKREILR LIETFLEKAE YQSHIGKQFV
0801: PPMMDPVLGD YARNVPDARE SEVLSLFATI INKYKVNMQD EVPRIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALVQLS SEQLKLVMDS
0901: VIWAFRHTER NIAETGLNLL LELLKKFQKS DFSNQFYRTY FMQIEQEIFA VLTDTFHKPG FKFHVLVLQH LFSLVESKSL TEPLWDASTV LQQYPNNAAF
1001: VLEYTIKLLS SSFPNMTTAE VTQFVNGLYE SRSDIARFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQIE RDIQNMLLIP GLIAPNEIQD DMADSYTIS
0001: MAAEKLRDLS QPIDVVLLDA TVEAFYSTGS KEERASADNI LRDLKANPDT WLQVVHILQN TSSTHTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISDV
0101: IVQLSRDEAS FRTERLYVNK LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS
0301: TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD
0401: GVKSEVTERQ KLYSDPMSKL RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LSKLSKQLSG EEWAWNNLNT
0501: LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT
0701: RVATSLGTFF LSQISLIFLD MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF VPPMMDQVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT
1001: EVTQFVNGLY ESRNDVGRFK DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS
0101: IVQLSRDEAS FRTERLYVNK LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS
0301: TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD
0401: GVKSEVTERQ KLYSDPMSKL RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LSKLSKQLSG EEWAWNNLNT
0501: LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT
0701: RVATSLGTFF LSQISLIFLD MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF VPPMMDQVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT
1001: EVTQFVNGLY ESRNDVGRFK DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS
Arabidopsis Description
XPO1BProtein EXPORTIN 1B [Source:UniProtKB/Swiss-Prot;Acc:F4IZR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.