Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23464 | Canola | cytosol | 87.08 | 87.49 |
| Bra021372.1-P | Field mustard | cytosol | 87.36 | 87.2 |
| VIT_06s0009g01690.t01 | Wine grape | cytosol | 4.37 | 87.04 |
| AT5G17020.1 | Thale cress | cytosol | 85.78 | 85.86 |
| CDY49924 | Canola | cytosol | 87.17 | 85.35 |
| VIT_16s0039g02220.t01 | Wine grape | cytosol | 84.2 | 84.2 |
| KRH24046 | Soybean | cytosol, nucleus | 82.71 | 82.64 |
| Solyc03g096920.2.1 | Tomato | cytosol, nucleus, plastid | 82.53 | 82.6 |
| KRH29017 | Soybean | cytosol, nucleus | 82.43 | 82.36 |
| KRH27740 | Soybean | cytosol | 81.97 | 82.35 |
| GSMUA_Achr8P33200_001 | Banana | cytosol | 81.69 | 81.77 |
| KRH77701 | Soybean | cytosol | 81.32 | 81.7 |
| Os03t0858100-01 | Rice | cytosol, plasma membrane | 80.48 | 80.93 |
| EER90476 | Sorghum | cytosol | 80.3 | 80.67 |
| TraesCS5B01G561500.1 | Wheat | cytosol, golgi, unclear | 78.9 | 79.94 |
| TraesCS4A01G317800.1 | Wheat | cytosol, golgi | 79.18 | 79.7 |
| GSMUA_Achr1P25620_001 | Banana | cytosol | 81.6 | 79.31 |
| TraesCS5D01G568300.3 | Wheat | cytosol | 76.86 | 78.91 |
| EER98405 | Sorghum | cytosol | 77.88 | 78.54 |
| HORVU5Hr1G124770.13 | Barley | cytosol | 79.0 | 77.41 |
| Zm00001d034914_P037 | Maize | cytosol | 79.18 | 75.94 |
| CDY43150 | Canola | cytosol | 70.45 | 73.1 |
| Bra032016.1-P | Field mustard | cytosol | 70.45 | 73.1 |
| CDY28738 | Canola | cytosol | 71.38 | 73.0 |
| Zm00001d012815_P022 | Maize | cytosol | 76.21 | 71.24 |
| VIT_14s0006g01850.t01 | Wine grape | cytosol | 11.71 | 64.29 |
| CDY49926 | Canola | nucleus | 4.37 | 60.26 |
| VIT_06s0009g01700.t01 | Wine grape | extracellular, peroxisome, plastid | 1.67 | 40.91 |
| CDY49925 | Canola | cytosol, peroxisome, plastid | 1.21 | 40.62 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.8 | EntrezGene:821074 | ProteinID:AAF26113.1 | ProteinID:AEE73903.1 | EMBL:AF367278 |
| EMBL:AJ277542 | EMBL:AK226898 | InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT3G03110 | EnsemblPlantsGene:AT3G03110 |
| RefSeq:AT3G03110 | TAIR:AT3G03110 | RefSeq:AT3G03110-TAIR-G | EnsemblPlants:AT3G03110.1 | TAIR:AT3G03110.1 | Unigene:At.10434 |
| EMBL:BT004508 | InterPro:CRM1_C_dom | InterPro:Exportin-1/Importin-b-like | UniProt:F4IZR5 | GO:GO:0000003 | GO:GO:0000055 |
| GO:GO:0000056 | GO:GO:0003674 | GO:GO:0005049 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008536 |
| GO:GO:0009506 | GO:GO:0009553 | GO:GO:0009555 | GO:GO:0009653 | GO:GO:0009846 | GO:GO:0009856 |
| GO:GO:0009860 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0030154 | GO:GO:0031965 | GO:GO:0040007 | GO:GO:0046825 | GO:GO:0051028 | InterPro:IPR001494 |
| InterPro:IPR011989 | InterPro:Importin-beta_N | RefSeq:NP_566193.2 | PFAM:PF03810 | PFAM:PF08389 | PFAM:PF08767 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50166 | PANTHER:PTHR11223 | PANTHER:PTHR11223:SF2 |
| SMART:SM00913 | SMART:SM01102 | SUPFAM:SSF48371 | UniParc:UPI0000196AE7 | Symbol:XPO1B | SEG:seg |
Description
XPO1BProtein EXPORTIN 1B [Source:UniProtKB/Swiss-Prot;Acc:F4IZR5]
Coordinates
chr3:+:708698..717093
Molecular Weight (calculated)
123200.0 Da
IEP (calculated)
5.591
GRAVY (calculated)
-0.036
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAEKLRDLS QPIDVVLLDA TVEAFYSTGS KEERASADNI LRDLKANPDT WLQVVHILQN TSSTHTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISDV
0101: IVQLSRDEAS FRTERLYVNK LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS
0301: TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD
0401: GVKSEVTERQ KLYSDPMSKL RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LSKLSKQLSG EEWAWNNLNT
0501: LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT
0701: RVATSLGTFF LSQISLIFLD MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF VPPMMDQVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT
1001: EVTQFVNGLY ESRNDVGRFK DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS
0101: IVQLSRDEAS FRTERLYVNK LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS
0301: TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD
0401: GVKSEVTERQ KLYSDPMSKL RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LSKLSKQLSG EEWAWNNLNT
0501: LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT
0701: RVATSLGTFF LSQISLIFLD MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF VPPMMDQVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT
1001: EVTQFVNGLY ESRNDVGRFK DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.