Factsheet for AT5G17020.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02737	Canola	cytosol	95.26	95.17
CDX70730	Canola	cytosol	93.77	94.65
CDX85477	Canola	cytosol	94.7	94.61
CDX78722	Canola	cytosol	93.58	94.46
CDX69407	Canola	cytosol	93.02	93.9
CDY16965	Canola	cytosol	93.95	93.87
CDX70734	Canola	cytosol	77.49	93.7
Bra023593.1-P	Field mustard	cytosol	94.7	93.57
Bra006382.1-P	Field mustard	cytosol	93.4	92.79
CDY69253	Canola	cytosol, plasma membrane	54.51	91.71
Bra008580.1-P	Field mustard	cytosol	93.86	89.69
VIT_16s0039g02220.t01	Wine grape	cytosol	88.47	88.38
KRH24046	Soybean	cytosol, nucleus	86.98	86.82
KRH29017	Soybean	cytosol, nucleus	86.88	86.72
Solyc03g096920.2.1	Tomato	cytosol, nucleus, plastid	86.7	86.7
AT3G03110.1	Thale cress	cytosol	85.86	85.78
KRH27740	Soybean	cytosol	84.74	85.06
GSMUA_Achr8P33200_001	Banana	cytosol	84.84	84.84
KRH77701	Soybean	cytosol	84.09	84.41
TraesCS5B01G561500.1	Wheat	cytosol, golgi, unclear	82.33	83.33
VIT_06s0009g01690.t01	Wine grape	cytosol	4.19	83.33
EER90476	Sorghum	cytosol	82.79	83.1
Os03t0858100-01	Rice	cytosol, plasma membrane	82.7	83.08
TraesCS4A01G317800.1	Wheat	cytosol, golgi	82.6	83.07
GSMUA_Achr1P25620_001	Banana	cytosol	84.65	82.2
TraesCS5D01G568300.3	Wheat	cytosol	80.09	82.16
HORVU5Hr1G124770.13	Barley	cytosol	82.14	80.42
EER98405	Sorghum	cytosol	79.44	80.04
Zm00001d034914_P037	Maize	cytosol	81.77	78.34
Zm00001d012815_P022	Maize	cytosol	78.88	73.68
VIT_14s0006g01850.t01	Wine grape	cytosol	12.09	66.33
VIT_06s0009g01700.t01	Wine grape	extracellular, peroxisome, plastid	2.23	54.55

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.8	EntrezGene:831565	UniProt:A0A178U9W2	ProteinID:AED92373.1	ProteinID:AED92374.1
InterPro:ARM-like	InterPro:ARM-type_fold	ArrayExpress:AT5G17020	EnsemblPlantsGene:AT5G17020	RefSeq:AT5G17020	TAIR:AT5G17020
RefSeq:AT5G17020-TAIR-G	EnsemblPlants:AT5G17020.1	TAIR:AT5G17020.1	EMBL:AY056126	EMBL:AY096633	Unigene:At.492
ProteinID:CAB56597.1	ProteinID:CAC01715.1	InterPro:CRM1_C_dom	InterPro:Exportin-1/Importin-b-like	GO:GO:0000003	GO:GO:0000055
GO:GO:0000056	GO:GO:0003674	GO:GO:0004871	GO:GO:0004872	GO:GO:0005049	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005635	GO:GO:0005643	GO:GO:0005737	GO:GO:0005829	GO:GO:0006611	GO:GO:0006810
GO:GO:0006886	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008536	GO:GO:0009408
GO:GO:0009553	GO:GO:0009555	GO:GO:0009628	GO:GO:0009653	GO:GO:0009846	GO:GO:0009856
GO:GO:0009860	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049
GO:GO:0030154	GO:GO:0031965	GO:GO:0040007	GO:GO:0046825	GO:GO:0051028	InterPro:IPR001494
InterPro:IPR011989	InterPro:Importin-beta_N	RefSeq:NP_001190324.1	RefSeq:NP_197204.1	ProteinID:OAO90419.1	PFAM:PF03810
PFAM:PF08389	PFAM:PF08767	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PFscan:PS50166	PANTHER:PTHR11223	PANTHER:PTHR11223:SF2	UniProt:Q9SMV6
SMART:SM00913	SMART:SM01102	SUPFAM:SSF48371	UniParc:UPI00000ACAF9	Symbol:XPO1A	EMBL:Y18469
SEG:seg	:	:	:	:	:

Description

XPO1XPO1A [Source:UniProtKB/TrEMBL;Acc:A0A178U9W2]

Coordinates

chr5:+:5594632..5602969

Molecular Weight (calculated)

123250.0 Da

IEP (calculated)

5.269

GRAVY (calculated)

-0.077

Length

1075 amino acids

Sequence
(BLAST)

0001: MAAEKLRDLS QPIDVGVLDA TVAAFFVTGS KEERAAADQI LRDLQANPDM WLQVVHILQN TNSLDTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG
0401: LGSQVMQRRQ LYSHPMSKLR GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML RKLNKQLSGE EWAWNNLNTL
0501: CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR
0601: KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS
0701: AATSLGTYFL SQISLIFLDM LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV PPMMESVLGD YARNVPDARE
0801: SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFRHTER NIAETGLNLL
0901: LEMLKNFQQS EFCNQFYRSY FMQIEQEIFA VLTDTFHKPG FKLHVLVLQQ LFCLPESGAL TEPLWDATTV PYPYPDNVAF VREYTIKLLS SSFPNMTAAE
1001: VTQFVNGLYE SRNDPSGFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMLSIP GLIAPNEIQD EMVDS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.