Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
26371478
nucleus: 28394025 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0039g02220.t01 | Wine grape | cytosol | 91.07 | 90.99 |
| KRH24046 | Soybean | cytosol, nucleus | 87.72 | 87.56 |
| KRH29017 | Soybean | cytosol, nucleus | 87.72 | 87.56 |
| VIT_06s0009g01690.t01 | Wine grape | cytosol | 4.37 | 87.04 |
| AT5G17020.1 | Thale cress | cytosol | 86.7 | 86.7 |
| KRH27740 | Soybean | cytosol | 86.33 | 86.65 |
| KRH77701 | Soybean | cytosol | 85.86 | 86.18 |
| CDX85477 | Canola | cytosol | 86.14 | 86.06 |
| CDY02737 | Canola | cytosol | 85.86 | 85.78 |
| GSMUA_Achr8P33200_001 | Banana | cytosol | 85.77 | 85.77 |
| CDX69407 | Canola | cytosol | 84.74 | 85.54 |
| CDX70730 | Canola | cytosol | 84.56 | 85.35 |
| CDY16965 | Canola | cytosol | 85.3 | 85.22 |
| Bra023593.1-P | Field mustard | cytosol | 86.14 | 85.11 |
| EER90476 | Sorghum | cytosol | 84.65 | 84.97 |
| CDX78722 | Canola | cytosol | 84.09 | 84.88 |
| Os03t0858100-01 | Rice | cytosol, plasma membrane | 84.37 | 84.77 |
| CDX70734 | Canola | cytosol | 69.77 | 84.36 |
| TraesCS5B01G561500.1 | Wheat | cytosol, golgi, unclear | 83.26 | 84.28 |
| GSMUA_Achr1P25620_001 | Banana | cytosol | 86.6 | 84.1 |
| TraesCS4A01G317800.1 | Wheat | cytosol, golgi | 83.53 | 84.0 |
| CDY69253 | Canola | cytosol, plasma membrane | 49.67 | 83.57 |
| Bra006382.1-P | Field mustard | cytosol | 83.91 | 83.36 |
| TraesCS5D01G568300.3 | Wheat | cytosol | 81.02 | 83.11 |
| AT3G03110.1 | Thale cress | cytosol | 82.6 | 82.53 |
| EER98405 | Sorghum | cytosol | 80.93 | 81.54 |
| Bra008580.1-P | Field mustard | cytosol | 85.3 | 81.51 |
| HORVU5Hr1G124770.13 | Barley | cytosol | 83.07 | 81.33 |
| Zm00001d034914_P037 | Maize | cytosol | 83.53 | 80.04 |
| CDY23464 | Canola | cytosol | 79.72 | 80.02 |
| Bra021372.1-P | Field mustard | cytosol | 79.81 | 79.59 |
| CDY49924 | Canola | cytosol | 80.19 | 78.43 |
| Zm00001d012815_P022 | Maize | cytosol | 80.47 | 75.15 |
| Bra032016.1-P | Field mustard | cytosol | 66.98 | 69.43 |
| CDY43150 | Canola | cytosol | 66.88 | 69.33 |
| CDY28738 | Canola | cytosol | 67.53 | 69.01 |
| VIT_14s0006g01850.t01 | Wine grape | cytosol | 12.0 | 65.82 |
| VIT_06s0009g01700.t01 | Wine grape | extracellular, peroxisome, plastid | 2.33 | 56.82 |
| CDY49926 | Canola | nucleus | 3.81 | 52.56 |
| CDY49925 | Canola | cytosol, peroxisome, plastid | 1.3 | 43.75 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.8 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:CRM1_C_dom | UniProt:D1MAF2 |
| InterPro:Exportin-1/Importin-b-like | GO:GO:0000055 | GO:GO:0000056 | GO:GO:0003674 | GO:GO:0005049 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0008536 | GO:GO:0046825 |
| EMBL:GU126514 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | PFAM:PF03810 | PFAM:PF08389 |
| PFAM:PF08767 | PFscan:PS50166 | PANTHER:PTHR11223 | PANTHER:PTHR11223:SF2 | SMART:SM00913 | SMART:SM01102 |
| SUPFAM:SSF48371 | EnsemblPlantsGene:Solyc03g096920.2 | EnsemblPlants:Solyc03g096920.2.1 | UniParc:UPI0001BD33DB | SEG:seg | : |
Description
Exportin-1 [Source:UniProtKB/TrEMBL;Acc:D1MAF2]
Coordinates
chr3:-:59284805..59300116
Molecular Weight (calculated)
123620.0 Da
IEP (calculated)
5.323
GRAVY (calculated)
-0.099
Length
1075 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAEKLRDLS QPIDVSLLDA TVAAFYGTGS KEERAAADHI LRDLQNNPDM WLQVVHILSS TQSLNTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV
0101: IVKLSSDEAS LRRERLYISK LNIILVQILK HEWPARWRSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSVSHRT ELIRATLATL HAFLSWIPLG YIFESTLLEI LLKFFPLPSY RNLTLQCLTE VAALNFGDFY NEQYIKMYTI FMGQLQSVLP PNTSIPEAYA
0301: NGSNEEQAFI QNLALFFTSF FKSHIRVLES SQENIGALLV GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFEAAHHNLD NPAMTTNMMG LQMPLLSGMN
0401: DGLGAQLMQR RQLYSGPMSK LRLLMISRMA KPEEVLIVED ENGNIVRETM KDNDVLVQYK IMRETLIYLS HLDHDDTEKQ MLKKLSNQLN GEDWSWNNLN
0501: TLCWAIGSIS GSMVEEQENR FLVMVIRDLL NLCEITKGKD NKAVIASNIM YVVGQYPRFL RAHWKFLKTV VNKLFEFMHE THPGVQDMAC DTFLKIVQKC
0601: KRKFVVVQVG ENEPFVSELL TTLPTTIADL EPHQIHTFYE SVGQMIQAEP DPQKRDEYLQ RLMELPNQRW NEIIGQARQS VDYLKDQDVI RAVLNILQTN
0701: TSAASSLGTY FLPQISLIFL DMLNVYRMYS ELISTSIAQG GPYASRTSIV KLLRSVKRET LKLIETFLDK AEDQSHIGKQ FVPPMMDPVL GDYARNVPDA
0801: RESEVLSLFA TIINKYKGAM IEDVPRIFEA AFQCTLEMIT KNFEDYPEHR LKFFSLLRAI ATHCFAALIR LSSEQLKLVM DSIIWAFRHT ERNIAETGLN
0901: LLLAMLKNFQ NSEFANQFYR TYYLTIEQEI FAVLTDTFHK PGFKLHVLVL QHLFCMVVML SEPLWDASTV PCSYPNNVEF VREYTIKLLS TSFPNMTAAE
1001: VTQFVSGLFD STNDLPTFKN HIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMRSIP GLIAPNEIQD EMVDS
0101: IVKLSSDEAS LRRERLYISK LNIILVQILK HEWPARWRSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSVSHRT ELIRATLATL HAFLSWIPLG YIFESTLLEI LLKFFPLPSY RNLTLQCLTE VAALNFGDFY NEQYIKMYTI FMGQLQSVLP PNTSIPEAYA
0301: NGSNEEQAFI QNLALFFTSF FKSHIRVLES SQENIGALLV GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFEAAHHNLD NPAMTTNMMG LQMPLLSGMN
0401: DGLGAQLMQR RQLYSGPMSK LRLLMISRMA KPEEVLIVED ENGNIVRETM KDNDVLVQYK IMRETLIYLS HLDHDDTEKQ MLKKLSNQLN GEDWSWNNLN
0501: TLCWAIGSIS GSMVEEQENR FLVMVIRDLL NLCEITKGKD NKAVIASNIM YVVGQYPRFL RAHWKFLKTV VNKLFEFMHE THPGVQDMAC DTFLKIVQKC
0601: KRKFVVVQVG ENEPFVSELL TTLPTTIADL EPHQIHTFYE SVGQMIQAEP DPQKRDEYLQ RLMELPNQRW NEIIGQARQS VDYLKDQDVI RAVLNILQTN
0701: TSAASSLGTY FLPQISLIFL DMLNVYRMYS ELISTSIAQG GPYASRTSIV KLLRSVKRET LKLIETFLDK AEDQSHIGKQ FVPPMMDPVL GDYARNVPDA
0801: RESEVLSLFA TIINKYKGAM IEDVPRIFEA AFQCTLEMIT KNFEDYPEHR LKFFSLLRAI ATHCFAALIR LSSEQLKLVM DSIIWAFRHT ERNIAETGLN
0901: LLLAMLKNFQ NSEFANQFYR TYYLTIEQEI FAVLTDTFHK PGFKLHVLVL QHLFCMVVML SEPLWDASTV PCSYPNNVEF VREYTIKLLS TSFPNMTAAE
1001: VTQFVSGLFD STNDLPTFKN HIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMRSIP GLIAPNEIQD EMVDS
0001: MAAEKLRDLS QPIDVGVLDA TVAAFFVTGS KEERAAADQI LRDLQANPDM WLQVVHILQN TNSLDTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG
0401: LGSQVMQRRQ LYSHPMSKLR GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML RKLNKQLSGE EWAWNNLNTL
0501: CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR
0601: KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS
0701: AATSLGTYFL SQISLIFLDM LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV PPMMESVLGD YARNVPDARE
0801: SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFRHTER NIAETGLNLL
0901: LEMLKNFQQS EFCNQFYRSY FMQIEQEIFA VLTDTFHKPG FKLHVLVLQQ LFCLPESGAL TEPLWDATTV PYPYPDNVAF VREYTIKLLS SSFPNMTAAE
1001: VTQFVNGLYE SRNDPSGFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMLSIP GLIAPNEIQD EMVDS
0101: IVQLSSNEAS FRSERLYVNK LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ KIKELKQSLN SEFKLIHELC
0201: LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS
0301: SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG
0401: LGSQVMQRRQ LYSHPMSKLR GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML RKLNKQLSGE EWAWNNLNTL
0501: CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR
0601: KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS
0701: AATSLGTYFL SQISLIFLDM LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV PPMMESVLGD YARNVPDARE
0801: SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFRHTER NIAETGLNLL
0901: LEMLKNFQQS EFCNQFYRSY FMQIEQEIFA VLTDTFHKPG FKLHVLVLQQ LFCLPESGAL TEPLWDATTV PYPYPDNVAF VREYTIKLLS SSFPNMTAAE
1001: VTQFVNGLYE SRNDPSGFKN NIRDFLVQSK EFSAQDNKDL YAEEAAAQRE RERQRMLSIP GLIAPNEIQD EMVDS
Arabidopsis Description
XPO1XPO1A [Source:UniProtKB/TrEMBL;Acc:A0A178U9W2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.