Factsheet for Bra032016.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43150	Canola	cytosol	99.61	99.61
VIT_06s0009g01690.t01	Wine grape	cytosol	3.86	74.07
Bra021372.1-P	Field mustard	cytosol	74.73	71.89
AT3G03110.1	Thale cress	cytosol	73.1	70.45
KRH27740	Soybean	cytosol	70.11	67.88
Bra023593.1-P	Field mustard	cytosol	71.17	67.83
VIT_16s0039g02220.t01	Wine grape	cytosol	70.2	67.66
KRH77701	Soybean	cytosol	69.72	67.51
KRH24046	Soybean	cytosol, nucleus	70.11	67.5
Bra006382.1-P	Field mustard	cytosol	70.4	67.47
KRH29017	Soybean	cytosol, nucleus	70.01	67.41
Solyc03g096920.2.1	Tomato	cytosol, nucleus, plastid	69.43	66.98
GSMUA_Achr8P33200_001	Banana	cytosol	68.27	65.86
Os03t0858100-01	Rice	cytosol, plasma membrane	67.89	65.79
EER90476	Sorghum	cytosol	67.79	65.64
Bra008580.1-P	Field mustard	cytosol	71.17	65.6
TraesCS5B01G561500.1	Wheat	cytosol, golgi, unclear	66.83	65.25
TraesCS4A01G317800.1	Wheat	cytosol, golgi	66.73	64.73
EER98405	Sorghum	cytosol	66.35	64.48
TraesCS5D01G568300.3	Wheat	cytosol	64.8	64.12
GSMUA_Achr1P25620_001	Banana	cytosol	68.18	63.87
HORVU5Hr1G124770.13	Barley	cytosol	66.92	63.21
Zm00001d034914_P037	Maize	cytosol	67.21	62.12
Zm00001d012815_P022	Maize	cytosol	66.15	59.6
VIT_14s0006g01850.t01	Wine grape	cytosol	9.93	52.55
VIT_06s0009g01700.t01	Wine grape	extracellular, peroxisome, plastid	0.96	22.73

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.8	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra032016	EnsemblPlants:Bra032016.1
EnsemblPlants:Bra032016.1-P	InterPro:CRM1_C_dom	InterPro:Exportin-1/Importin-b-like	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0008536	InterPro:IPR001494	InterPro:IPR011989	InterPro:Importin-beta_N	UniProt:M4ET86
PFAM:PF03810	PFAM:PF08389	PFAM:PF08767	PFscan:PS50166	PANTHER:PTHR11223	PANTHER:PTHR11223:SF2
SMART:SM00913	SMART:SM01102	SUPFAM:SSF48371	UniParc:UPI000254615D	SEG:seg	:

Description

AT3G03110 (E=0.0) XPO1B, CRM1B | XPO1B; binding / protein transporter

Coordinates

chrA02:+:26647602..26654125

Molecular Weight (calculated)

119674.0 Da

IEP (calculated)

6.358

GRAVY (calculated)

-0.059

Length

1037 amino acids

Sequence
(BLAST)

0001: MAAERLRDLS KPMDVALLDS TVDVFYATGS KEERAAADNI LRDLKANPDT WLQVTHILQN TRSTHTKYFA LQVLEGVIKY RWKALPVVQR DGMKIYISDV
0101: IVELSKNEAS FRSERLYINK LNLILVQILK HEWPANWRSF IPDLVNAAKT SESICENSMA ILKLLSEEIF NFSRGEMIQR KINDLKDEFK LIHELCLYVL
0201: SASKRPALIR ATLSALHAYL SWIPLSYIFQ SPLMENLLKF FPVPAYRDLT LQCLSKVAAL KYEEHYRNQV VQMYMIFMKH LEGMLPFNIN IPEAYSAGST
0301: EEQASLLRAN ILYFTLHINI LETTSETIPF LLAGLEYLIK ISYVDDTEVF KVCCDYWHLL VSELFTSGQR MVFHPPTVGS IEPEITTPKI LYSDQLSKLR
0401: GLMITRMAKP EEVLIVEDEN GNIVRETMKD SDVLLQYKIM RETLIFLTHF DHDDTERQML SKLSKQINKE EWTWNNLNTL CWAIGSISGS MDVANEDRFL
0501: VKVIRALLSF SGIMKGNDNK DVIASNIMYV FGQYPRFLKG NWQYMMVIVK KLFDFMHSTQ PGVKDMACDT FLKIAQQCKH IFLVVQVGKQ EPFVSELLES
0601: LTTTIRHLEP HQIQTFYESV ACIIQAESNP QKIGEYIERL MALPNQRWAE IIVEARQNVD SLIDPDVIHD VLTILQTNTR VSASVGKYFL SQISLIFLNT
0701: LNIYKMYSEL VSSSIGDSGP CASRISVIKL LRSVKREILN LIKTFLDKNE KNPYIGKHFV PPIMNIILAD YARNVPDARE SEVLSLFETI INQYKFAMQD
0801: DVPRIFESVF HCTLEMITKN FEDYPEHRLK FFLLLRAIAT SCFRALLQLS SEQLKLVMDS VIWAFRHTER NIAETGLKLL LVLLKKFQKS AFSNQFYRTY
0901: FMQIEQEIIA VLTDTFHKPE FYWHVFVLQR LFQLVESGAL TEPLWDASTV PQQYPNNAAF VCAHTTNLLS SSFPNISVPE VTEFVKGLYE LRDHPVPFKN
1001: NVRDFLIRSK EFSAQDNKDL YAGPIASDEN PDEMSDS

Best Arabidopsis Sequence Match ( AT3G03110.1 )
(BLAST)

0001: MAAEKLRDLS QPIDVVLLDA TVEAFYSTGS KEERASADNI LRDLKANPDT WLQVVHILQN TSSTHTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISDV
0101: IVQLSRDEAS FRTERLYVNK LNIILVQIVK QEWPAKWKSF IPDLVIAAKT SETICENCMA ILKLLSEEVF DFSKGEMTQQ KIKELKQSLN SEFQLIHELC
0201: LYVLSASQRQ ELIRATLSAL HAYLSWIPLG YIFESPLLEI LLKFFPVPAY RNLTLQCLSE VASLNFGDFY DMQYVKMYSI FMNQLQAILP LNLNIPEAYS
0301: TGSSEEQAFI QNLALFFTSF FKLHIKILES APENISLLLA GLGYLISISY VDDTEVFKVC LDYWNSLVLE LFGTRHHACH PALTPSLFGL QMAFLPSTVD
0401: GVKSEVTERQ KLYSDPMSKL RGLMISRTAK PEEVLIVEDE NGNIVRETMK DNDVLVQYKI MRETLIYLSH LDHEDTEKQM LSKLSKQLSG EEWAWNNLNT
0501: LCWAIGSISG SMVVEQENRF LVMVIRDLLS LCEVVKGKDN KAVIASNIMY VVGQYSRFLR AHWKFLKTVV HKLFEFMHET HPGVQDMACD TFLKIVQKCK
0601: RKFVIVQVGE SEPFVSELLS GLATIVGDLQ PHQIHTFYES VGSMIQAESD PQKRGEYLQR LMALPNQKWA EIIGQARQSA DILKEPDVIR TVLNILQTNT
0701: RVATSLGTFF LSQISLIFLD MLNVYRMYSE LVSSSIANGG PYASRTSLVK LLRSVKREIL KLIETFLDKA ENQPHIGKQF VPPMMDQVLG DYARNVPDAR
0801: ESEVLSLFAT IINKYKVVMR DEVPLIFEAV FQCTLEMITK NFEDYPEHRL KFFSLLRAIA TFCFRALIQL SSEQLKLVMD SVIWAFRHTE RNIAETGLNL
0901: LLEMLKNFQK SDFCNKFYQT YFLQIEQEVF AVLTDTFHKP GFKLHVLVLQ HLFSLVESGS LAEPLWDAAT VPHPYSNNVA FVLEYTTKLL SSSFPNMTTT
1001: EVTQFVNGLY ESRNDVGRFK DNIRDFLIQS KEFSAQDNKD LYAEEAAAQM ERERQRMLSI PGLIAPSEIQ DDMADS

Arabidopsis Description

XPO1BProtein EXPORTIN 1B [Source:UniProtKB/Swiss-Prot;Acc:F4IZR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.